MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | SubName: Full=Zinc finger protein 1066 {ECO:0000313|Ensembl:ENSDARP00000109074}; |
 |
|
| MyHits synonyms | E7F1G0_DANRE , E7F1G0 , H0WER1 , 8A8A345F93ABD201 |
 Legends: 1, C2H2-type. {ECO:0000259|PROSITE:PS50157}; 2, ismart:ZnF_C2H2 [T]; 3, ipat:ZINC_FINGER_C2H2_1 [T]; 4, iprf:ZINC_FINGER_C2H2_2 [T].
| |
ID E7F1G0_DANRE Unreviewed; 438 AA.
AC E7F1G0; H0WER1;
DT 08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT 09-DEC-2015, sequence version 2.
DT 10-MAY-2017, entry version 48.
DE SubName: Full=Zinc finger protein 1066 {ECO:0000313|Ensembl:ENSDARP00000109074};
GN Name=znf1066 {ECO:0000313|Ensembl:ENSDARP00000109074,
GN ECO:0000313|ZFIN:ZDB-GENE-110913-60};
GN Synonyms=si:dkey-156k2.6 {ECO:0000313|ZFIN:ZDB-GENE-110913-60};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000109074, ECO:0000313|Proteomes:UP000000437};
RN [1] {ECO:0000313|Ensembl:ENSDARP00000109074}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000109074};
RG Ensembl;
RL Submitted (APR-2011) to UniProtKB.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000125339}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000125339};
RG Ensembl;
RL Submitted (JAN-2012) to UniProtKB.
RN [3] {ECO:0000313|Ensembl:ENSDARP00000109074, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000109074,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSDARP00000109074}.
CC -----------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution-NoDerivs License
CC -----------------------------------------------------------------------
DR EMBL; BX890613; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR STRING; 7955.ENSDARP00000125339; -.
DR PaxDb; E7F1G0; -.
DR Ensembl; ENSDART00000128867; ENSDARP00000109074; ENSDARG00000091477.
DR Ensembl; ENSDART00000150403; ENSDARP00000125339; ENSDARG00000091477.
DR ZFIN; ZDB-GENE-110913-60; znf1066.
DR eggNOG; KOG1721; Eukaryota.
DR eggNOG; COG5048; LUCA.
DR GeneTree; ENSGT00860000134123; -.
DR InParanoid; H0WER1; -.
DR OrthoDB; EOG091G02KC; -.
DR TreeFam; TF350925; -.
DR Proteomes; UP000000437; Chromosome 4.
DR Bgee; ENSDARG00000091477; -.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 3.30.40.10; -; 1.
DR InterPro; IPR013087; Znf_C2H2_type.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR SMART; SM00355; ZnF_C2H2; 13.
DR SUPFAM; SSF57667; SSF57667; 7.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 11.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 13.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT DOMAIN 73 104 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 105 132 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 133 160 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 161 188 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 189 216 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 217 244 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 245 272 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 273 300 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 301 328 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 329 356 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 357 381 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 385 413 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 414 438 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 385 405 ismart:ZnF_C2H2 [T]
FT MYHIT 303 323 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 357 381 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 73 99 ismart:ZnF_C2H2 [T]
FT MYHIT 189 211 ismart:ZnF_C2H2 [T]
FT MYHIT 73 104 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 359 379 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 107 127 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 301 328 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 191 211 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 273 300 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 161 188 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 247 267 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 416 436 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 219 239 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 105 127 ismart:ZnF_C2H2 [T]
FT MYHIT 161 183 ismart:ZnF_C2H2 [T]
FT MYHIT 245 267 ismart:ZnF_C2H2 [T]
FT MYHIT 273 295 ismart:ZnF_C2H2 [T]
FT MYHIT 245 272 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 275 295 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 217 244 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 357 379 ismart:ZnF_C2H2 [T]
FT MYHIT 301 323 ismart:ZnF_C2H2 [T]
FT MYHIT 329 356 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 329 351 ismart:ZnF_C2H2 [T]
FT MYHIT 414 436 ismart:ZnF_C2H2 [T]
FT MYHIT 133 160 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 331 351 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 105 132 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 133 155 ismart:ZnF_C2H2 [T]
FT MYHIT 217 239 ismart:ZnF_C2H2 [T]
FT MYHIT 163 183 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 135 155 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 189 216 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 414 438 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 385 413 iprf:ZINC_FINGER_C2H2_2 [T]
SQ SEQUENCE 438 AA; 50809 MW; 8A8A345F93ABD201 CRC64;
MAFIKVESED LKIEETFTVK QEDLQEQTDL MVLKEETHQQ NEMEEKPQEI TTDEKPTLNK
KTSSRGRPRK SKSACNFSSK QSRKSFSQKS NLDVHMRVHT REKPYTCEQC GKSFGHIQGF
ENHMRIHTGE KPFSCKQCGK SFSQKANLDV HMRVHTKERP YTCEQCGKSF TYKQGFTTHM
RIHTGERPYT CQQCKKSFYH PGNFAVHMRI HTGERPYTCQ QCGKSFYQSG NFAAHMRIHT
GERPYSCIQC GKSFKQNGTL EVHMRTHTGD RSFICTQCGK HFSQKHDLNI HMRIHTGKKP
HTCTQCGKRF TQKTSLDNHM RIHTGEKPYR CTECGKTFPH KSTLKHHMKT HTEEKPFTCV
QCGKRFTTKA SLKNHMNGHT GTIVLTCDQC EKSLTRKDSI RKHIRKINSG EDPFRCSECG
KGFKHKRSLN THLKLHIG
//
| |