ID E7EYV9_DANRE Unreviewed; 1024 AA.
AC E7EYV9;
DT 08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT 08-MAR-2011, sequence version 1.
DT 10-MAY-2017, entry version 49.
DE SubName: Full=Coiled-coil domain-containing 142 {ECO:0000313|Ensembl:ENSDARP00000138176};
GN Name=ccdc142 {ECO:0000313|Ensembl:ENSDARP00000138176,
GN ECO:0000313|ZFIN:ZDB-GENE-030131-6705};
GN Synonyms=si:dkey-102m7.4 {ECO:0000313|ZFIN:ZDB-GENE-030131-6705};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP IDENTIFICATION.
RC STRAIN=Tuebingen;
RG Ensembl;
RL Submitted (FEB-2012) to UniProtKB.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000138176, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000138176,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
RN [3] {ECO:0000313|Ensembl:ENSDARP00000138176}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000138176};
RG Ensembl;
RL Submitted (NOV-2015) to UniProtKB.
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DR EMBL; BX323828; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_005157262.1; XM_005157205.3.
DR RefSeq; XP_697757.4; XM_692665.8.
DR UniGene; Dr.75304; -.
DR Ensembl; ENSDART00000169932; ENSDARP00000138176; ENSDARG00000101377.
DR GeneID; 569287; -.
DR KEGG; dre:569287; -.
DR CTD; 84865; -.
DR ZFIN; ZDB-GENE-030131-6705; ccdc142.
DR eggNOG; ENOG410IEKX; Eukaryota.
DR eggNOG; ENOG4111G4R; LUCA.
DR GeneTree; ENSGT00390000009871; -.
DR OMA; LNALCED; -.
DR OrthoDB; EOG091G035R; -.
DR PRO; PR:E7EYV9; -.
DR Proteomes; UP000000437; Chromosome 14.
DR Bgee; ENSDARG00000004780; -.
DR InterPro; IPR026700; CCDC142.
DR PANTHER; PTHR21436; PTHR21436; 1.
DR Pfam; PF14923; CCDC142; 1.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
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CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 547 1001 ipfam:CCDC142 [T]
SQ SEQUENCE 1024 AA; 115709 MW; 6BAE332597FD15DE CRC64;
MAHSSGSSQD GQTDSKTESH TQAVPDKTDS SAAESPENQH CDNGQRPSYY SEILPDEYIS
NEKFDASWYQ SSFTKSLQRA EALFRNRLNP SLKRLMRQKS KDGSWESESE SIGSCSSRSI
QRLGETLQNL SSQCHILHDP AGGRSFGCIR GLSSSEEEEF YYHPQAAAFT QHYCQLQHLM
DQRAQLLFFH EYARRTQMAT CFVAQLGSVL EKTQLLLPDK GQVTEQPNST WNLNLRALCQ
EMQVHVSHWD LLWAKAHSDL RLRRALFSRI ETLSSMQRTL CLLALQAMQL LEQCIYTALL
ALTAAQLDRV PRDALVDLLC AVELYNEIVE DTESQCKTST QSSKLMFNSD WPQLGSSTIR
KATGPTIFPV EQLMMILAQS RAQKVAKQLY TWASQQSNLL LANNPKELKG HTKLNSRLLS
SPTINLHTVQ LEPQAAVEDT PQSPLHKLWS SNLPFSLFIS RDRACLDTLF KVLVTSTNLL
APHIPKKPPL DRTVDLEDSV VICRRASDGE EKLLNRPRMS SRAHDAAAVD LRKSDACVKL
FSNYKNLLWK QFGKAVIRHF YYQPYNSTLG SINQWNDEML LLLVSWLKHS YFEDLIPEEC
KESLSDFCFY LLSTAAFTQW DEMKCLSLGS GLKEKCVPGA KLEGCAIRTA TMDLILQLFL
PLHTVLQLLQ HPDIESGDIE SKSLKRNHLA LLCRSVATVH SSTIWVMSKA FQFLASWSIT
KFLLVTQGDL KDLKDSVESL VHLTRAVIRD SAVHPLIVQQ TDSLSKALTE LQAFSDLVLR
TFTMDCKKMS TEIFEQTMPS ARHWRINHKT ELPSSPSDYA ACAVQSVIGQ VLEGVQPLPD
NARVPALTEA MTAFMEAWME HILKQKIKFS IQGALQLKQD FDLIRDMIRS EEYSLSEELH
QKLLSLRVFH QVDNAIVCLL QQPMAKPYLP SRGWEPFRHC CPNSAQVMDQ AAAGSLNNLE
SMDIQAACQQ ALTQAESSLT PELLSSTPQE SYLAAAQQEW LDLRIHSGSR WKLPVLQCFT
RSEP
//
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