Entry euk:D3ZYF6_RAT

ID   D3ZYF6_RAT              Unreviewed;      1102 AA.
AC   D3ZYF6;
DT   20-APR-2010, integrated into UniProtKB/TrEMBL.
DT   22-JUL-2015, sequence version 3.
DT   10-MAY-2017, entry version 42.
DE   SubName: Full=Zinc finger protein 862 {ECO:0000313|Ensembl:ENSRNOP00000051389};
GN   Name=Zfp862 {ECO:0000313|Ensembl:ENSRNOP00000051389,
GN   ECO:0000313|RGD:1598054};
OS   Rattus norvegicus (Rat).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
OC   Muroidea; Muridae; Murinae; Rattus.
OX   NCBI_TaxID=10116 {ECO:0000313|Ensembl:ENSRNOP00000051389, ECO:0000313|Proteomes:UP000002494};
RN   [1] {ECO:0000313|Ensembl:ENSRNOP00000051389, ECO:0000313|Proteomes:UP000002494}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000051389,
RC   ECO:0000313|Proteomes:UP000002494};
RX   PubMed=15057822; DOI=10.1038/nature02426;
RG   Rat Genome Sequencing Project Consortium;
RA   Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J.,
RA   Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G.,
RA   Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G.,
RA   Morgan M., Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G.,
RA   Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S.,
RA   Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T.,
RA   Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T.,
RA   Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A.,
RA   Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M.,
RA   Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K.,
RA   Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S.,
RA   Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J.,
RA   Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y.,
RA   Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A.,
RA   Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J.,
RA   D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R.,
RA   Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A.,
RA   Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E.,
RA   Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E.,
RA   Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J.,
RA   Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D.,
RA   Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M.,
RA   Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O.,
RA   Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O.,
RA   Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H.,
RA   Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S.,
RA   Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J.,
RA   Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M.,
RA   Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E.,
RA   Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F.,
RA   Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K.,
RA   Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S.,
RA   Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M.,
RA   Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M.,
RA   Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A.,
RA   Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S.,
RA   Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G.,
RA   Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H.,
RA   Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R.,
RA   Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M.,
RA   Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H.,
RA   Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S.,
RA   Collins F.S.;
RT   "Genome sequence of the Brown Norway rat yields insights into
RT   mammalian evolution.";
RL   Nature 428:493-521(2004).
RN   [2] {ECO:0000313|Ensembl:ENSRNOP00000051389}
RP   IDENTIFICATION.
RC   STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000051389};
RG   Ensembl;
RL   Submitted (JUL-2011) to UniProtKB.
CC   -!- CAUTION: The sequence shown here is derived from an Ensembl
CC       automatic analysis pipeline and should be considered as
CC       preliminary data. {ECO:0000313|Ensembl:ENSRNOP00000051389}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; AC123494; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   STRING; 10116.ENSRNOP00000051389; -.
DR   PaxDb; D3ZYF6; -.
DR   Ensembl; ENSRNOT00000048576; ENSRNOP00000051389; ENSRNOG00000024795.
DR   RGD; 1598054; Zfp862.
DR   eggNOG; KOG1721; Eukaryota.
DR   eggNOG; COG5048; LUCA.
DR   GeneTree; ENSGT00530000064154; -.
DR   InParanoid; D3ZYF6; -.
DR   OMA; RTACTQF; -.
DR   OrthoDB; EOG091G0P6J; -.
DR   TreeFam; TF350866; -.
DR   Proteomes; UP000002494; Chromosome 4.
DR   Bgee; ENSRNOG00000024795; -.
DR   GO; GO:0005622; C:intracellular; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR   CDD; cd07765; KRAB_A-box; 1.
DR   InterPro; IPR008906; HATC_C_dom.
DR   InterPro; IPR001909; KRAB.
DR   InterPro; IPR006580; Znf_TTF.
DR   Pfam; PF05699; Dimer_Tnp_hAT; 1.
DR   Pfam; PF01352; KRAB; 1.
DR   SMART; SM00597; ZnF_TTF; 2.
DR   SUPFAM; SSF109640; SSF109640; 1.
DR   PROSITE; PS50805; KRAB; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000002494};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002494}.
FT   DOMAIN      320    392       KRAB. {ECO:0000259|PROSITE:PS50805}.
CC   --------------------------------------------------------------------------
CC   The following FT lines are automated annotations from the MyHits database.
CC   --------------------------------------------------------------------------
FT   MYHIT        10     35       ipfam:KRAB [T]
FT   MYHIT       320    392       iprf:KRAB [T]
FT   MYHIT       123    206       ismart:ZnF_TTF [T]
FT   MYHIT      1007   1058       ipfam:Dimer_Tnp_hAT [T]
FT   MYHIT       451    534       ismart:ZnF_TTF [T]
SQ   SEQUENCE   1102 AA;  123788 MW;  6C2C7335346F4A95 CRC64;
     LSRVFSFQVP VTFDDITVYL LQEEWMLLGQ PQKDFSTSDK LTASLGPTAA NLELFCGFWL
     GSMQGQRSLL NRHPGETHVN YMEEREKGQY LPPQKKTCHA PYFSTESSTM EKDSTGGNRK
     PPKPRSIQKS WFTKFPWLIM NEEQTALFCA ICREYPSVRD KRSRLIEGYR GPFKVETLKY
     HAKSKAHIFC VHALAAKDPV WAAHLQNLRE SPADLLASPE HLLTADNPTF YLPGPLGNFD
     GIDELLSSPR AEPEDTSGSG AIPALSLDCE SDLRQKEIGS DILSPSNGST LFKDSTDFCS
     QEPPDQEWPE GFRESGEPPA TFEDLASYIT KWKPKLREKL TLELYVCDTM RTSFNLNVSP
     EPPAATPDLI TKLEQRAAPW IEDPNGLKSG KSRSLGREKM EATREANSQT QASALEFVSQ
     PASVETCSVH RSPSMCEEEV DGPRNVKSTY RPRSIQRSWF GQFPWLVMDS KETKLFCSVC
     KERPTLHDKS SRLVQGYTGP FKVETLKYHE VSKAHKLCVN TVEIRDDSPQ PTLTPEISGA
     LMANMEHFFN AAYSIAYHSR PLNDFEKVLQ QLQNTGTTLL GKYRNRTACT QFIKHISETL
     KKEILRDIRN SPCVSLLLDS CVDSSSQACV GIFMRYLKQT EVKESYITLA PLSSETVDGY
     FETIIAALDE LDIPFRKPGW VVGLGTDGSA MLSCKGGLTE KFREIIPQLL PVHSVAHRLH
     VAVVDACSDI DLVRKCDRHI RTVFKFYQSS NKRLSELQGV AAPLEQEIIR LKDLNAVRWV
     ASRRCTLNAF VMNWPALVRH LQSVVEAGGQ VGQRAKGIMK LMKSFHFIKF CHFILDFLSI
     YKPLSEVCQK DLVLVTELNS TLGRAYVALE SLRQQAGPKE EAFNAGFQDG QLHGIFLNRV
     EMAEQRFQAD RERTVLTGAE FLQQRFGADR PAQLRSMAVF DTTAWPRGAE LACFGNHDIL
     SLARYFALSL PVGYREEALL KEWLSLKAAT QNLPFSTLCK SALTQPGQFP LLSRLVAVVV
     SVPISTACCA RGFKAMSRIR TDERTKLSNE VLNTLMMTAV NGVAVTEYDP QPAIQHWYLT
     SSGRRFSHLY ACAQVPTRSH AS
//