ID D3ZRH5_RAT Unreviewed; 499 AA.
AC D3ZRH5;
DT 20-APR-2010, integrated into UniProtKB/TrEMBL.
DT 20-APR-2010, sequence version 1.
DT 10-MAY-2017, entry version 61.
DE SubName: Full=Zinc finger protein 275 {ECO:0000313|Ensembl:ENSRNOP00000075303};
DE SubName: Full=Zinc finger protein 275 (Predicted) {ECO:0000313|EMBL:EDL85055.1};
GN Name=Zfp275 {ECO:0000313|Ensembl:ENSRNOP00000075303,
GN ECO:0000313|RGD:1564630};
GN Synonyms=Zfp275_predicted {ECO:0000313|EMBL:EDL85055.1};
GN ORFNames=rCG_43791 {ECO:0000313|EMBL:EDL85055.1};
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
OC Muroidea; Muridae; Murinae; Rattus.
OX NCBI_TaxID=10116 {ECO:0000313|Ensembl:ENSRNOP00000075303, ECO:0000313|Proteomes:UP000002494};
RN [1] {ECO:0000313|Ensembl:ENSRNOP00000075303, ECO:0000313|Proteomes:UP000002494}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000075303,
RC ECO:0000313|Proteomes:UP000002494};
RX PubMed=15057822; DOI=10.1038/nature02426;
RG Rat Genome Sequencing Project Consortium;
RA Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J.,
RA Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G.,
RA Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G.,
RA Morgan M., Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G.,
RA Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S.,
RA Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T.,
RA Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T.,
RA Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A.,
RA Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M.,
RA Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K.,
RA Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S.,
RA Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J.,
RA Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y.,
RA Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A.,
RA Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J.,
RA D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R.,
RA Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A.,
RA Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E.,
RA Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E.,
RA Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J.,
RA Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D.,
RA Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M.,
RA Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O.,
RA Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O.,
RA Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H.,
RA Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S.,
RA Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J.,
RA Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M.,
RA Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E.,
RA Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F.,
RA Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K.,
RA Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S.,
RA Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M.,
RA Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M.,
RA Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A.,
RA Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S.,
RA Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G.,
RA Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H.,
RA Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R.,
RA Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M.,
RA Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H.,
RA Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S.,
RA Collins F.S.;
RT "Genome sequence of the Brown Norway rat yields insights into
RT mammalian evolution.";
RL Nature 428:493-521(2004).
RN [2] {ECO:0000313|EMBL:EDL85055.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=BN {ECO:0000313|EMBL:EDL85055.1};
RX PubMed=15632090; DOI=10.1101/gr.2889405;
RA Florea L., Di Francesco V., Miller J., Turner R., Yao A., Harris M.,
RA Walenz B., Mobarry C., Merkulov G.V., Charlab R., Dew I., Deng Z.,
RA Istrail S., Li P., Sutton G.;
RT "Gene and alternative splicing annotation with AIR.";
RL Genome Res. 15:54-66(2005).
RN [3] {ECO:0000313|EMBL:EDL85055.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=BN {ECO:0000313|EMBL:EDL85055.1};
RA Mural R.J., Li P.W., Adams M.D., Amanatides P.G., Baden-Tillson H.,
RA Barnstead M., Chin S.H., Dew I., Evans C.A., Ferriera S., Flanigan M.,
RA Fosler C., Glodek A., Gu Z., Holt R.A., Jennings D., Kraft C.L.,
RA Lu F., Nguyen T., Nusskern D.R., Pfannkoch C.M., Sitter C.,
RA Sutton G.G., Venter J.C., Wang Z., Woodage T., Zheng X.H., Zhong F.;
RL Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|Ensembl:ENSRNOP00000075303}
RP IDENTIFICATION.
RC STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000075303};
RG Ensembl;
RL Submitted (JUN-2015) to UniProtKB.
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DR EMBL; AABR07042457; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CH474099; EDL85055.1; -; Genomic_DNA.
DR RefSeq; NP_001099813.1; NM_001106343.1.
DR RefSeq; XP_017457422.1; XM_017601933.1.
DR UniGene; Rn.44882; -.
DR Ensembl; ENSRNOT00000079860; ENSRNOP00000075303; ENSRNOG00000061073.
DR GeneID; 293849; -.
DR KEGG; rno:293849; -.
DR CTD; 27081; -.
DR RGD; 1564630; Zfp275.
DR eggNOG; KOG1721; Eukaryota.
DR eggNOG; COG5048; LUCA.
DR GeneTree; ENSGT00840000130038; -.
DR KO; K09228; -.
DR OMA; GDCRKVF; -.
DR OrthoDB; EOG091G02KC; -.
DR Proteomes; UP000002494; Chromosome X.
DR Bgee; ENSRNOG00000018419; -.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IBA:GO_Central.
DR InterPro; IPR013087; Znf_C2H2_type.
DR SMART; SM00355; ZnF_C2H2; 11.
DR SUPFAM; SSF57667; SSF57667; 6.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 11.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 11.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000002494};
KW Reference proteome {ECO:0000313|Proteomes:UP000002494}.
FT DOMAIN 169 196 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 197 224 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 251 278 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 279 306 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 307 334 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 335 362 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 363 390 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 391 418 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 419 446 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 447 474 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 475 499 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
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CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 419 441 ismart:ZnF_C2H2 [T]
FT MYHIT 475 497 ismart:ZnF_C2H2 [T]
FT MYHIT 251 278 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 169 191 ismart:ZnF_C2H2 [T]
FT MYHIT 363 390 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 391 418 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 171 191 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 335 362 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 391 413 ismart:ZnF_C2H2 [T]
FT MYHIT 393 413 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 421 441 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 251 273 ismart:ZnF_C2H2 [T]
FT MYHIT 475 498 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 199 219 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 281 301 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 419 446 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 475 499 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 335 357 ismart:ZnF_C2H2 [T]
FT MYHIT 279 306 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 197 219 ismart:ZnF_C2H2 [T]
FT MYHIT 279 301 ismart:ZnF_C2H2 [T]
FT MYHIT 169 196 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 449 469 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 253 273 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 309 329 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 447 469 ismart:ZnF_C2H2 [T]
FT MYHIT 365 385 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 307 329 ismart:ZnF_C2H2 [T]
FT MYHIT 447 474 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 363 385 ismart:ZnF_C2H2 [T]
FT MYHIT 307 334 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 337 357 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 197 224 iprf:ZINC_FINGER_C2H2_2 [T]
SQ SEQUENCE 499 AA; 55995 MW; 12EDEDA396DE9366 CRC64;
MSHPCVSFLA PPAPQGLALP QDGTPGNQVL AVPLEMPEAQ DLVSFDIVPW HLTEQEWLSL
SLSPEQQALA YSRAVTSIGV PVVNPALVSH LSQGQLLLVS DPSLSTDHNK HPESTSATSH
QKMGEEAQLQ EMASTSSPRA NDPSSEVKQN GDSGGRGGSP QNLPVEHHFA CKECGDTFRL
KVLLVQHQRV HSEEKGWECG DCRKVFRGVS EFNEHRKSHA AVATQPRPGP SWALEDALEK
REQMEREAKP FECEECGKRF KKNAGLSQHL RVHSREKPFD CEECGQSFKA NTHLFRHQKL
HTSEKPFACK ACSRDFLDRQ ELLKHQRMHT GHLPFDCDDC GKSFRGVNGL AEHQRIHSGA
KPYGCPHCGK LFRRSSELTK HRRIHTGEKP YECNQCGKAF RQSSSLLEHT RIHSGERPYA
CGDCSKAFRG PSDLIKHRRI HSGLKPYECD KCGKAFRRSS GLSRHRRIHS GAKRCECSEC
GRVFKRRSAL QKHQPSHHE
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