Entry euk:D3ZMK5_RAT

ID   D3ZMK5_RAT              Unreviewed;       571 AA.
AC   D3ZMK5;
DT   20-APR-2010, integrated into UniProtKB/TrEMBL.
DT   20-APR-2010, sequence version 1.
DT   10-MAY-2017, entry version 54.
DE   SubName: Full=Zinc finger protein 654 {ECO:0000313|Ensembl:ENSRNOP00000039110};
GN   Name=Zfp654 {ECO:0000313|Ensembl:ENSRNOP00000039110,
GN   ECO:0000313|RGD:1308321};
OS   Rattus norvegicus (Rat).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
OC   Muroidea; Muridae; Murinae; Rattus.
OX   NCBI_TaxID=10116 {ECO:0000313|Ensembl:ENSRNOP00000039110, ECO:0000313|Proteomes:UP000002494};
RN   [1] {ECO:0000313|Ensembl:ENSRNOP00000039110, ECO:0000313|Proteomes:UP000002494}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000039110,
RC   ECO:0000313|Proteomes:UP000002494};
RX   PubMed=15057822; DOI=10.1038/nature02426;
RG   Rat Genome Sequencing Project Consortium;
RA   Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J.,
RA   Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G.,
RA   Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G.,
RA   Morgan M., Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G.,
RA   Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S.,
RA   Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T.,
RA   Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T.,
RA   Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A.,
RA   Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M.,
RA   Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K.,
RA   Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S.,
RA   Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J.,
RA   Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y.,
RA   Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A.,
RA   Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J.,
RA   D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R.,
RA   Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A.,
RA   Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E.,
RA   Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E.,
RA   Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J.,
RA   Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D.,
RA   Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M.,
RA   Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O.,
RA   Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O.,
RA   Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H.,
RA   Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S.,
RA   Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J.,
RA   Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M.,
RA   Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E.,
RA   Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F.,
RA   Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K.,
RA   Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S.,
RA   Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M.,
RA   Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M.,
RA   Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A.,
RA   Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S.,
RA   Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G.,
RA   Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H.,
RA   Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R.,
RA   Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M.,
RA   Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H.,
RA   Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S.,
RA   Collins F.S.;
RT   "Genome sequence of the Brown Norway rat yields insights into
RT   mammalian evolution.";
RL   Nature 428:493-521(2004).
RN   [2] {ECO:0000313|Ensembl:ENSRNOP00000039110}
RP   IDENTIFICATION.
RC   STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000039110};
RG   Ensembl;
RL   Submitted (JUL-2011) to UniProtKB.
CC   -!- CAUTION: The sequence shown here is derived from an Ensembl
CC       automatic analysis pipeline and should be considered as
CC       preliminary data. {ECO:0000313|Ensembl:ENSRNOP00000039110}.
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DR   EMBL; AABR07033023; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   STRING; 10116.ENSRNOP00000039110; -.
DR   PaxDb; D3ZMK5; -.
DR   PeptideAtlas; D3ZMK5; -.
DR   Ensembl; ENSRNOT00000050533; ENSRNOP00000039110; ENSRNOG00000029956.
DR   UCSC; RGD:1308321; rat.
DR   RGD; 1308321; Zfp654.
DR   eggNOG; KOG1721; Eukaryota.
DR   eggNOG; COG5048; LUCA.
DR   GeneTree; ENSGT00840000129803; -.
DR   InParanoid; D3ZMK5; -.
DR   OMA; TECGDDY; -.
DR   OrthoDB; EOG091G0B4Q; -.
DR   PhylomeDB; D3ZMK5; -.
DR   TreeFam; TF326007; -.
DR   Proteomes; UP000002494; Chromosome 11.
DR   Bgee; ENSRNOG00000029956; -.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   InterPro; IPR013087; Znf_C2H2_type.
DR   SMART; SM00355; ZnF_C2H2; 6.
DR   PROSITE; PS00028; ZINC_FINGER_C2H2_1; 5.
DR   PROSITE; PS50157; ZINC_FINGER_C2H2_2; 3.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000002494};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002494}.
FT   DOMAIN       25     52       C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT   DOMAIN      197    222       C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT   DOMAIN      266    290       C2H2-type. {ECO:0000259|PROSITE:PS50157}.
CC   --------------------------------------------------------------------------
CC   The following FT lines are automated annotations from the MyHits database.
CC   --------------------------------------------------------------------------
FT   MYHIT        27     47       ipat:ZINC_FINGER_C2H2_1 [T]
FT   MYHIT       238    260       ismart:ZnF_C2H2 [T]
FT   MYHIT       197    222       ismart:ZnF_C2H2 [T]
FT   MYHIT       266    290       ismart:ZnF_C2H2 [T]
FT   MYHIT       240    260       ipat:ZINC_FINGER_C2H2_1 [T]
FT   MYHIT       197    222       iprf:ZINC_FINGER_C2H2_2 [T]
FT   MYHIT       295    319       ismart:ZnF_C2H2 [T]
FT   MYHIT        25     47       ismart:ZnF_C2H2 [T]
FT   MYHIT       534    554       ismart:ZnF_C2H2 [T]
FT   MYHIT       266    290       iprf:ZINC_FINGER_C2H2_2 [T]
FT   MYHIT       199    222       ipat:ZINC_FINGER_C2H2_1 [T]
FT   MYHIT       268    290       ipat:ZINC_FINGER_C2H2_1 [T]
FT   MYHIT       297    319       ipat:ZINC_FINGER_C2H2_1 [T]
FT   MYHIT        25     52       iprf:ZINC_FINGER_C2H2_2 [T]
SQ   SEQUENCE   571 AA;  65061 MW;  F9845F8381A53FF0 CRC64;
     MLCNKEFLGG HIVRHAQAHQ KKGSFSCVIC GRKFRNRGLM QKHLKNHVKK IQRQQIATAQ
     QDDPEIITLE EINGSKSSIS FENGNSNTKS LEIETLTASS ERNKEVTREH MAEFIKIPIA
     MPENAMENIV ENGRPDTSFN NISESLSQCD DDYEEEENED NYEDDYDLNQ ETSVLHKING
     TVCHPKDVYA TDQEGNFKCP ALGCVRIFKR IGFLNMHART VHPTDLNVRQ TVMKWSKGKC
     KFCQRQFEDS QHFIDHLNRH SYPNVYFCLH FNCNESFKLP FQLAQHTKSH RIFQAQCSFP
     ECHELFEDLP LLYEHEAQHY LSKTPESSAQ LGEVVPNHQN IDPFSNENQT IHQPVSTSKS
     RKDSTEPKTC IDTMEKKTDS LVQNGNEHSD DSVSNISLID QKMPAIEPNP ENNHSPTDLV
     NGHSEIEQMP LVTSDATLKI DINRNGTENG SVIPNVISQE HSALSVSQAP SKPNLTSEHT
     SYGLILTKPF VRPLPPSYLD ERYLSMPKRR KFLTDIVDAC SDQDNMYKKP VKRLRCGKCL
     TTYCNAEALE AHLAQKKCQT LFGFDSDDES K
//