MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
Description | SubName: Full=Cytochrome P450 family 722 subfamily A polypeptide 1 {ECO:0000313|EMBL:AQK95770.1}; |
MyHits synonyms | C4J505_MAIZE , C4J505 , 68BF0F6F4C80E777 |
Legends: 1, TRANSMEM Helical. {ECO:0000256|SAM:Phobius}; 2, ipat:CYTOCHROME_P450 [T].
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ID C4J505_MAIZE Unreviewed; 550 AA. AC C4J505; DT 07-JUL-2009, integrated into UniProtKB/TrEMBL. DT 07-JUL-2009, sequence version 1. DT 10-MAY-2017, entry version 50. DE SubName: Full=Cytochrome P450 family 722 subfamily A polypeptide 1 {ECO:0000313|EMBL:AQK95770.1}; GN ORFNames=ZEAMMB73_Zm00001d011117 {ECO:0000313|EMBL:AQK95770.1}; OS Zea mays (Maize). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; OC PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; OC Zea. OX NCBI_TaxID=4577 {ECO:0000313|EMBL:ACR36255.1}; RN [1] {ECO:0000313|EMBL:ACR36255.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=B73 {ECO:0000313|EMBL:ACR36255.1}; RX PubMed=19936069; DOI=10.1371/journal.pgen.1000740; RA Soderlund C., Descour A., Kudrna D., Bomhoff M., Boyd L., Currie J., RA Angelova A., Collura K., Wissotski M., Ashley E., Morrow D., RA Fernandes J., Walbot V., Yu Y.; RT "Sequencing, mapping, and analysis of 27,455 maize full-length RT cDNAs."; RL PLoS Genet. 5:E1000740-E1000740(2009). RN [2] {ECO:0000313|Proteomes:UP000007305} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. B73 {ECO:0000313|Proteomes:UP000007305}; RX PubMed=19965430; DOI=10.1126/science.1178534; RA Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S., RA Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D., RA Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K., RA Fronick C., Courtney B., Rock S.M., Belter E., Du F., Kim K., RA Abbott R.M., Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M., RA Gillam B., Chen W., Yan L., Higginbotham J., Cardenas M., RA Waligorski J., Applebaum E., Phelps L., Falcone J., Kanchi K., RA Thane T., Scimone A., Thane N., Henke J., Wang T., Ruppert J., RA Shah N., Rotter K., Hodges J., Ingenthron E., Cordes M., Kohlberg S., RA Sgro J., Delgado B., Mead K., Chinwalla A., Leonard S., Crouse K., RA Collura K., Kudrna D., Currie J., He R., Angelova A., Rajasekar S., RA Mueller T., Lomeli R., Scara G., Ko A., Delaney K., Wissotski M., RA Lopez G., Campos D., Braidotti M., Ashley E., Golser W., Kim H., RA Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A., Fan C., RA Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T., RA Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L., RA Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P., RA Vaughn M.W., Ying K., Yeh C.-T., Emrich S.J., Jia Y., Kalyanaraman A., RA Hsia A.-P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C., RA Chaparro C., Chia J.-M., Deragon J.-M., Estill J.C., Fu Y., RA Jeddeloh J.A., Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z., RA Nagel D.H., McCann M.C., SanMiguel P., Myers A.M., Nettleton D., RA Nguyen J., Penning B.W., Ponnala L., Schneider K.L., Schwartz D.C., RA Sharma A., Soderlund C., Springer N.M., Sun Q., Wang H., Waterman M., RA Westerman R., Wolfgruber T.K., Yang L., Yu Y., Zhang L., Zhou S., RA Zhu Q., Bennetzen J.L., Dawe R.K., Jiang J., Jiang N., Presting G.G., RA Wessler S.R., Aluru S., Martienssen R.A., Clifton S.W., McCombie W.R., RA Wing R.A., Wilson R.K.; RT "The B73 maize genome: complexity, diversity, and dynamics."; RL Science 326:1112-1115(2009). RN [3] {ECO:0000313|EMBL:AQK95770.1} RP NUCLEOTIDE SEQUENCE. RC TISSUE=Seedling {ECO:0000313|EMBL:AQK95770.1}; RG Maize Genome Sequencing Project; RA Ware D.; RT "Update maize B73 reference genome by single molecule sequencing RT technologies."; RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases. RN [4] {ECO:0000313|EnsemblPlants:Zm00001d011117_T001} RP IDENTIFICATION. RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001d011117_T001}; RG EnsemblPlants; RL Submitted (OCT-2016) to UniProtKB. CC -!- SIMILARITY: Belongs to the cytochrome P450 family. CC {ECO:0000256|RuleBase:RU000461}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; BT085902; ACR36255.1; -; mRNA. DR EMBL; CM000784; AQK95770.1; -; Genomic_DNA. DR RefSeq; NP_001183271.1; NM_001196342.1. DR UniGene; Zm.33939; -. DR STRING; 4577.GRMZM2G363429_P01; -. DR EnsemblPlants; Zm00001d011117_T001; Zm00001d011117_T001; Zm00001d011117. DR GeneID; 100501664; -. DR Gramene; Zm00001d011117_T001; Zm00001d011117_T001; Zm00001d011117. DR KEGG; zma:100501664; -. DR eggNOG; KOG0157; Eukaryota. DR eggNOG; COG2124; LUCA. DR HOGENOM; HOG000237614; -. DR OMA; CASHATH; -. DR OrthoDB; EOG09360HH9; -. DR Proteomes; UP000007305; Chromosome 8. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR GO; GO:0020037; F:heme binding; IEA:InterPro. DR GO; GO:0005506; F:iron ion binding; IEA:InterPro. DR GO; GO:0004497; F:monooxygenase activity; IEA:UniProtKB-KW. DR GO; GO:0016705; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; IEA:InterPro. DR InterPro; IPR001128; Cyt_P450. DR InterPro; IPR017972; Cyt_P450_CS. DR InterPro; IPR002401; Cyt_P450_E_grp-I. DR Pfam; PF00067; p450; 1. DR PRINTS; PR00463; EP450I. DR PRINTS; PR00385; P450. DR SUPFAM; SSF48264; SSF48264; 1. DR PROSITE; PS00086; CYTOCHROME_P450; 1. PE 2: Evidence at transcript level; KW Complete proteome {ECO:0000313|Proteomes:UP000007305}; KW Heme {ECO:0000256|RuleBase:RU000461}; KW Iron {ECO:0000256|RuleBase:RU000461}; KW Membrane {ECO:0000256|SAM:Phobius}; KW Metal-binding {ECO:0000256|RuleBase:RU000461}; KW Monooxygenase {ECO:0000256|RuleBase:RU000461}; KW Oxidoreductase {ECO:0000256|RuleBase:RU000461}; KW Reference proteome {ECO:0000313|Proteomes:UP000007305}; KW Transmembrane {ECO:0000256|SAM:Phobius}; KW Transmembrane helix {ECO:0000256|SAM:Phobius}. FT TRANSMEM 23 44 Helical. {ECO:0000256|SAM:Phobius}. CC -------------------------------------------------------------------------- CC The following FT lines are automated annotations from the MyHits database. CC -------------------------------------------------------------------------- FT MYHIT 77 529 ipfam:p450 [T] FT MYHIT 491 500 ipat:CYTOCHROME_P450 [T] SQ SEQUENCE 550 AA; 62480 MW; 68BF0F6F4C80E777 CRC64; MDDMHRQLQA PPACQSHSSS SSIFFFFFLA AVIIYCVVII RRLIKFQGRR RVKNDHAAAA AAPPPPPPPR RGSRWWWSVV ETLAFLSANS SGRGFYHFVE ARHRRYGPGP CFRTSLLGAT HVFVSSADAA RSLLGAEPAG FSKRYVRTVA ELLGEHSLLC ASHATHRALR RAVAPLFNAQ ATASLAATFD GLTRRLMKRD WSSSTGAVVV LDAALDLTFE AICDMLIGRT LRPDARRRLQ SDVLAVTRAM LAFPLRLPGT RFHAGLRARK RIMDVLRQEI GSRQRQIMDM EEEEEEQQHG DDFLQSLLLL RSRRRRRSQQ QQHLLPSSSA HHNDDDDLFL TDDQILDNIL TLIIAGQVTT ASAITWMVKY LADNKVFQET LRSVQLELKQ QQQQEEADHD LLQHLNSMEL AYMTVKESLR MASIVSWFPR VALEDCQVAG FHIHKGWIVN IDARALHYDA TLYHNPTMFD PSRFKGGHSM HTKQPYSFLV FGAGGRTCLG MNLAKIMMLI FLHHLVTTWR WEMADDDPSL EKWAMFPRLR NGCPIHLARI // |