MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
Description | SubName: Full=MYB transcription factor {ECO:0000313|EMBL:AIB05129.1}; SubName: Full=MYB-transcription factor 100 {ECO:0000313|EMBL:ONM01234.1}; |
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MyHits synonyms | C0PN75_MAIZE , C0PN75 , 9D7C5888719E5803 |
![]() Legends: 1, NON_TER {ECO:0000313|EMBL:AIB05129.1}; 2, HTH myb-type DNA-binding. {ECO:0000259|PROSITE:PS51294}; 3, ipfam:Myb_DNA-binding [T].
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ID C0PN75_MAIZE Unreviewed; 351 AA. AC C0PN75; DT 05-MAY-2009, integrated into UniProtKB/TrEMBL. DT 05-MAY-2009, sequence version 1. DT 10-MAY-2017, entry version 61. DE SubName: Full=MYB transcription factor {ECO:0000313|EMBL:AIB05129.1}; DE SubName: Full=MYB-transcription factor 100 {ECO:0000313|EMBL:ONM01234.1}; GN Name=MYB100 {ECO:0000313|EMBL:AIB05129.1}; GN ORFNames=ZEAMMB73_Zm00001d030644 {ECO:0000313|EMBL:ONM01234.1}; OS Zea mays (Maize). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; OC PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; OC Zea. OX NCBI_TaxID=4577 {ECO:0000313|EMBL:ACN36641.1}; RN [1] {ECO:0000313|EMBL:ACN36641.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=B73 {ECO:0000313|EMBL:ACN36641.1}; RX PubMed=19936069; DOI=10.1371/journal.pgen.1000740; RA Soderlund C., Descour A., Kudrna D., Bomhoff M., Boyd L., Currie J., RA Angelova A., Collura K., Wissotski M., Ashley E., Morrow D., RA Fernandes J., Walbot V., Yu Y.; RT "Sequencing, mapping, and analysis of 27,455 maize full-length RT cDNAs."; RL PLoS Genet. 5:E1000740-E1000740(2009). RN [2] {ECO:0000313|EMBL:AIB05129.1} RP NUCLEOTIDE SEQUENCE. RA Burdo B., Gray J., Goetting-Minesky M.P., Wittler B., Hunt M., Li T., RA Velliquette D., Thomas J., Gentzel I., Dos Santos Brito M., RA Mejia-Guerra M.K., Connolly L.N., Qaisi D., Li W., Casas M.I., RA Doseff A.I., Grotewold E.; RT "The Maize TFome - Development of a transcription factor open reading RT frame collection for functional genomics."; RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases. RN [3] {ECO:0000313|EMBL:ONM01234.1, ECO:0000313|Proteomes:UP000007305} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. B73 {ECO:0000313|Proteomes:UP000007305}; RC TISSUE=Seedling {ECO:0000313|EMBL:ONM01234.1}; RG Maize Genome Sequencing Project; RA Ware D.; RT "Update maize B73 reference genome by single molecule sequencing RT technologies."; RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases. RN [4] {ECO:0000313|EnsemblPlants:Zm00001d030644_T001} RP IDENTIFICATION. RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001d030644_T001}; RG EnsemblPlants; RL Submitted (OCT-2016) to UniProtKB. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; BT069744; ACN36641.1; -; mRNA. DR EMBL; KJ727638; AIB05129.1; -; mRNA. DR EMBL; CM007647; ONM01234.1; -; Genomic_DNA. DR RefSeq; NP_001170329.1; NM_001176858.1. DR UniGene; Zm.103437; -. DR STRING; 4577.GRMZM2G143046_P01; -. DR EnsemblPlants; Zm00001d030644_T001; Zm00001d030644_T001; Zm00001d030644. DR GeneID; 100384300; -. DR Gramene; Zm00001d030644_T001; Zm00001d030644_T001; Zm00001d030644. DR KEGG; zma:100384300; -. DR eggNOG; KOG0048; Eukaryota. DR eggNOG; COG5147; LUCA. DR HOGENOM; HOG000237600; -. DR KO; K09422; -. DR OMA; DNEMVNG; -. DR OrthoDB; EOG09360J8V; -. DR Proteomes; UP000007305; Chromosome 1. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR InterPro; IPR009057; Homeobox-like. DR InterPro; IPR017930; Myb_dom. DR InterPro; IPR001005; SANT/Myb. DR Pfam; PF00249; Myb_DNA-binding; 2. DR SMART; SM00717; SANT; 2. DR SUPFAM; SSF46689; SSF46689; 1. DR PROSITE; PS51294; HTH_MYB; 2. PE 2: Evidence at transcript level; KW Complete proteome {ECO:0000313|Proteomes:UP000007305}; KW Reference proteome {ECO:0000313|Proteomes:UP000007305}. FT DOMAIN 52 108 HTH myb-type DNA-binding. FT {ECO:0000259|PROSITE:PS51294}. FT DOMAIN 109 159 HTH myb-type DNA-binding. FT {ECO:0000259|PROSITE:PS51294}. FT NON_TER 351 351 {ECO:0000313|EMBL:AIB05129.1}. CC -------------------------------------------------------------------------- CC The following FT lines are automated annotations from the MyHits database. CC -------------------------------------------------------------------------- FT MYHIT 109 159 iprf:HTH_MYB [T] FT MYHIT 57 104 ipfam:Myb_DNA-binding [T] FT MYHIT 110 153 ipfam:Myb_DNA-binding [T] FT MYHIT 56 106 ismart:SANT [T] FT MYHIT 52 108 iprf:HTH_MYB [T] FT MYHIT 109 157 ismart:SANT [T] SQ SEQUENCE 351 AA; 38797 MW; 9D7C5888719E5803 CRC64; MATTQSCQSR SSACSKAAAC FPAAVAVDEE HGHHSHQLKG GAQEEAENDN NKPELRRGPW TVDEDLTLVN YIADNGEGRW NNLARAAGLK RTGKSCRLRW LNYLRPDVKR GNFSADEQLL ILDLHTRWGN RWSKIAQHLP GRTDNEIKNY WRTRVQKHAK QLNCDANSKR FKDAMRYLWM PHLADDVDTI AAANDDDEDH HHHLRLLVLH HHQAQHLQQA AAAAGGAAND LAAGAYDVRQ LHALPSSGMA ATSSSDSLAS ESYDDGGLLF ANLRAGEMLM DGGDWAAQQE ADQGLWPPPP PPPSDLDQSV VQAAGAGAGQ FQDMELSGWV QGFSESITDN FWALEEIWKM Q // |