Entry euk:B6T495_MAIZE

ID   B6T495_MAIZE            Unreviewed;       214 AA.
AC   B6T495;
DT   16-DEC-2008, integrated into UniProtKB/TrEMBL.
DT   16-DEC-2008, sequence version 1.
DT   10-MAY-2017, entry version 38.
DE   SubName: Full=Cold acclimation protein COR413-PM1 {ECO:0000313|EMBL:ACG31928.1};
DE   SubName: Full=Cold-regulated 413 plasma membrane protein 2 {ECO:0000313|EMBL:AQK62607.1};
GN   ORFNames=ZEAMMB73_Zm00001d013179 {ECO:0000313|EMBL:AQK62607.1};
OS   Zea mays (Maize).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae;
OC   PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae;
OC   Zea.
OX   NCBI_TaxID=4577 {ECO:0000313|EMBL:ACG31928.1};
RN   [1] {ECO:0000313|EMBL:ACG31928.1}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=18937034; DOI=10.1007/s11103-008-9415-4;
RA   Alexandrov N.N., Brover V.V., Freidin S., Troukhan M.E.,
RA   Tatarinova T.V., Zhang H., Swaller T.J., Lu Y.P., Bouck J.,
RA   Flavell R.B., Feldmann K.A.;
RT   "Insights into corn genes derived from large-scale cDNA sequencing.";
RL   Plant Mol. Biol. 69:179-194(2009).
RN   [2] {ECO:0000313|EMBL:ACN37049.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=B73 {ECO:0000313|EMBL:ACN37049.1};
RX   PubMed=19936069; DOI=10.1371/journal.pgen.1000740;
RA   Soderlund C., Descour A., Kudrna D., Bomhoff M., Boyd L., Currie J.,
RA   Angelova A., Collura K., Wissotski M., Ashley E., Morrow D.,
RA   Fernandes J., Walbot V., Yu Y.;
RT   "Sequencing, mapping, and analysis of 27,455 maize full-length
RT   cDNAs.";
RL   PLoS Genet. 5:E1000740-E1000740(2009).
RN   [3] {ECO:0000313|Proteomes:UP000007305}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. B73 {ECO:0000313|Proteomes:UP000007305};
RX   PubMed=19965430; DOI=10.1126/science.1178534;
RA   Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S.,
RA   Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D.,
RA   Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K.,
RA   Fronick C., Courtney B., Rock S.M., Belter E., Du F., Kim K.,
RA   Abbott R.M., Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M.,
RA   Gillam B., Chen W., Yan L., Higginbotham J., Cardenas M.,
RA   Waligorski J., Applebaum E., Phelps L., Falcone J., Kanchi K.,
RA   Thane T., Scimone A., Thane N., Henke J., Wang T., Ruppert J.,
RA   Shah N., Rotter K., Hodges J., Ingenthron E., Cordes M., Kohlberg S.,
RA   Sgro J., Delgado B., Mead K., Chinwalla A., Leonard S., Crouse K.,
RA   Collura K., Kudrna D., Currie J., He R., Angelova A., Rajasekar S.,
RA   Mueller T., Lomeli R., Scara G., Ko A., Delaney K., Wissotski M.,
RA   Lopez G., Campos D., Braidotti M., Ashley E., Golser W., Kim H.,
RA   Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A., Fan C.,
RA   Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T.,
RA   Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L.,
RA   Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P.,
RA   Vaughn M.W., Ying K., Yeh C.-T., Emrich S.J., Jia Y., Kalyanaraman A.,
RA   Hsia A.-P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C.,
RA   Chaparro C., Chia J.-M., Deragon J.-M., Estill J.C., Fu Y.,
RA   Jeddeloh J.A., Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z.,
RA   Nagel D.H., McCann M.C., SanMiguel P., Myers A.M., Nettleton D.,
RA   Nguyen J., Penning B.W., Ponnala L., Schneider K.L., Schwartz D.C.,
RA   Sharma A., Soderlund C., Springer N.M., Sun Q., Wang H., Waterman M.,
RA   Westerman R., Wolfgruber T.K., Yang L., Yu Y., Zhang L., Zhou S.,
RA   Zhu Q., Bennetzen J.L., Dawe R.K., Jiang J., Jiang N., Presting G.G.,
RA   Wessler S.R., Aluru S., Martienssen R.A., Clifton S.W., McCombie W.R.,
RA   Wing R.A., Wilson R.K.;
RT   "The B73 maize genome: complexity, diversity, and dynamics.";
RL   Science 326:1112-1115(2009).
RN   [4] {ECO:0000313|EMBL:AQK62607.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Seedling {ECO:0000313|EMBL:AQK62607.1};
RG   Maize Genome Sequencing Project;
RA   Ware D.;
RT   "Update maize B73 reference genome by single molecule sequencing
RT   technologies.";
RL   Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN   [5] {ECO:0000313|EnsemblPlants:Zm00001d013179_T001}
RP   IDENTIFICATION.
RC   STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001d013179_T001};
RG   EnsemblPlants;
RL   Submitted (OCT-2016) to UniProtKB.
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DR   EMBL; EU959810; ACG31928.1; -; mRNA.
DR   EMBL; BT070152; ACN37049.1; -; mRNA.
DR   EMBL; CM000781; AQK62607.1; -; Genomic_DNA.
DR   STRING; 4577.GRMZM2G052423_P01; -.
DR   EnsemblPlants; Zm00001d013179_T001; Zm00001d013179_T001; Zm00001d013179.
DR   Gramene; Zm00001d013179_T001; Zm00001d013179_T001; Zm00001d013179.
DR   eggNOG; ENOG410IVQJ; Eukaryota.
DR   eggNOG; ENOG4111SCF; LUCA.
DR   OMA; YLFHEHI; -.
DR   OrthoDB; EOG09360RWR; -.
DR   Proteomes; UP000007305; Chromosome 5.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   InterPro; IPR008892; COR413.
DR   Pfam; PF05562; WCOR413; 1.
PE   2: Evidence at transcript level;
KW   Complete proteome {ECO:0000313|Proteomes:UP000007305};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007305};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     48     74       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     86    104       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    132    152       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    158    176       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    196    213       Helical. {ECO:0000256|SAM:Phobius}.
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CC   The following FT lines are automated annotations from the MyHits database.
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FT   MYHIT        24    201       ipfam:WCOR413 [T]
SQ   SEQUENCE   214 AA;  23332 MW;  20EDA32C1300516F CRC64;
     MGKGFPSYLA MKTGPEGGDG AAAAAQQALI DADLRNLGVA ARKLANHAFV LGGGLGFGTS
     FLKWLAFLAA VYLLILDRTN WKTNMLTALL VPYIFFTLPN VLFSLIRGEV GKWIAIIALI
     LRLFFPRHFP DWLELPGSII LLTAVAPSLF AHTFRDDLVG VFICLAIGCY LLQEHIRASD
     GLRNAFRKGN GVSNSIGILL LFIYPVWTGV LQIL
//