ID B3DFL2_DANRE Unreviewed; 197 AA.
AC B3DFL2;
DT 22-JUL-2008, integrated into UniProtKB/TrEMBL.
DT 22-JUL-2008, sequence version 1.
DT 10-MAY-2017, entry version 53.
DE SubName: Full=Zgc:193538 {ECO:0000313|EMBL:AAI62084.1, ECO:0000313|Ensembl:ENSDARP00000098900};
GN ORFNames=zgc:193538 {ECO:0000313|EMBL:AAI62084.1,
GN ECO:0000313|Ensembl:ENSDARP00000098900,
GN ECO:0000313|ZFIN:ZDB-GENE-041111-206};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|EMBL:AAI62084.1};
RN [1] {ECO:0000313|EMBL:AAI62084.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000098900}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000098900};
RG Ensembl;
RL Submitted (FEB-2012) to UniProtKB.
RN [3] {ECO:0000313|Ensembl:ENSDARP00000098900, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000098900,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
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DR EMBL; BX855605; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC162084; AAI62084.1; -; mRNA.
DR EMBL; BC162089; AAI62089.1; -; mRNA.
DR RefSeq; NP_001124069.1; NM_001130597.1.
DR UniGene; Dr.134880; -.
DR Ensembl; ENSDART00000111863; ENSDARP00000098900; ENSDARG00000078807.
DR GeneID; 492631; -.
DR KEGG; dre:492631; -.
DR ZFIN; ZDB-GENE-041111-206; zgc:193538.
DR eggNOG; ENOG410IY9E; Eukaryota.
DR eggNOG; ENOG410Y7F5; LUCA.
DR GeneTree; ENSGT00390000000543; -.
DR HOVERGEN; HBG105366; -.
DR OMA; FLPELDH; -.
DR OrthoDB; EOG091G14JY; -.
DR Proteomes; UP000000437; Chromosome 5.
DR Bgee; ENSDARG00000078807; -.
DR GO; GO:0006303; P:double-strand break repair via nonhomologous end joining; IEA:InterPro.
DR InterPro; IPR027873; PAXX.
DR Pfam; PF15384; PAXX; 1.
PE 1: Evidence at protein level;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Proteomics identification {ECO:0000213|PeptideAtlas:B3DFL2};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
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CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 12 197 ipfam:PAXX [T]
SQ SEQUENCE 197 AA; 21770 MW; 059F87C825C81565 CRC64;
MEQNNSESKS VLCTLLDKND QSKYVFFTQK LPAGVINIGF TNGEDVWKTH LSEEILSQLF
KKFSLKSTED YTFKIKCACK TGRAFVKLLE DSAVLHLGAE ATDLSLSLAK LTDSEGRMEV
KDLLFKMADS LQQLDSQGAS SSFSPGKGYQ KRSAEFEPKK QHKGPVVAVK KRLPGDSLIN
PGTKRKKPAT GVAFDDE
//
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