MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
Description | SubName: Full=Cilia- and flagella-associated protein 251 {ECO:0000313|Ensembl:ENSMUSP00000129769}; SubName: Full=Wdr66 protein {ECO:0000313|EMBL:AAI38177.1}; |
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MyHits synonyms | B2RR19_MOUSE , B2RR19 , AE6E955A4FEDCDC1 |
![]() Legends: 1, WD_REPEATS_REGION. {ECO:0000259|PROSITE:PS50294}; 2, ismart:WD40 [T]; 3, ipfam:WD40 [T].
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ID B2RR19_MOUSE Unreviewed; 549 AA. AC B2RR19; DT 01-JUL-2008, integrated into UniProtKB/TrEMBL. DT 01-JUL-2008, sequence version 1. DT 10-MAY-2017, entry version 69. DE SubName: Full=Cilia- and flagella-associated protein 251 {ECO:0000313|Ensembl:ENSMUSP00000129769}; DE SubName: Full=Wdr66 protein {ECO:0000313|EMBL:AAI38177.1}; GN Name=Wdr66 {ECO:0000313|EMBL:AAI38177.1, GN ECO:0000313|Ensembl:ENSMUSP00000129769, ECO:0000313|MGI:MGI:1918495}; OS Mus musculus (Mouse). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; OC Muroidea; Muridae; Murinae; Mus; Mus. OX NCBI_TaxID=10090 {ECO:0000313|EMBL:AAI38177.1}; RN [1] {ECO:0000313|EMBL:AAI38177.1} RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. RC TISSUE=Brain {ECO:0000313|EMBL:AAI38177.1}; RX PubMed=15489334; DOI=10.1101/gr.2596504; RG The MGC Project Team; RA Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., RA Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., RA Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., RA Feolo M., Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., RA Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., RA Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., RA Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., RA Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., RA Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., RA Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., RA Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., RA Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., RA Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., RA Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., RA Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., RA Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., RA Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., RA Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., RA Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., RA Makowski K.A., Bosak S., Malek J.; RT "The status, quality, and expansion of the NIH full-length cDNA RT project: the Mammalian Gene Collection (MGC)."; RL Genome Res. 14:2121-2127(2004). RN [2] {ECO:0000313|Ensembl:ENSMUSP00000129769, ECO:0000313|Proteomes:UP000000589} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000129769, RC ECO:0000313|Proteomes:UP000000589}; RX PubMed=19468303; DOI=10.1371/journal.pbio.1000112; RA Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., RA She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., RA Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., RA Zhou S., Teague B., Potamousis K., Churas C., Place M., Herschleb J., RA Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., RA Lindblad-Toh K., Eichler E.E., Ponting C.P.; RT "Lineage-specific biology revealed by a finished genome assembly of RT the mouse."; RL PLoS Biol. 7:E1000112-E1000112(2009). RN [3] {ECO:0000213|PubMed:21183079} RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=21183079; DOI=10.1016/j.cell.2010.12.001; RA Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R., RA Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.; RT "A tissue-specific atlas of mouse protein phosphorylation and RT expression."; RL Cell 143:1174-1189(2010). RN [4] {ECO:0000313|Ensembl:ENSMUSP00000129769} RP IDENTIFICATION. RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000129769}; RG Ensembl; RL Submitted (FEB-2012) to UniProtKB. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AC113504; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AC163337; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; BC138176; AAI38177.1; -; mRNA. DR UniGene; Mm.444012; -. DR STRING; 10090.ENSMUSP00000113309; -. DR Ensembl; ENSMUST00000170536; ENSMUSP00000129769; ENSMUSG00000029442. DR UCSC; uc008znl.1; mouse. DR MGI; MGI:1918495; Wdr66. DR eggNOG; ENOG410JR21; Eukaryota. DR eggNOG; ENOG410XQRH; LUCA. DR GeneTree; ENSGT00390000013370; -. DR HOGENOM; HOG000067979; -. DR HOVERGEN; HBG068255; -. DR Proteomes; UP000000589; Chromosome 5. DR Bgee; ENSMUSG00000029442; -. DR Gene3D; 2.130.10.10; -; 2. DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom. DR InterPro; IPR001680; WD40_repeat. DR InterPro; IPR017986; WD40_repeat_dom. DR Pfam; PF00400; WD40; 1. DR SMART; SM00320; WD40; 6. DR SUPFAM; SSF50978; SSF50978; 2. DR PROSITE; PS50294; WD_REPEATS_REGION; 1. PE 1: Evidence at protein level; KW Complete proteome {ECO:0000313|Proteomes:UP000000589}; KW Proteomics identification {ECO:0000213|MaxQB:B2RR19}; KW Reference proteome {ECO:0000313|Proteomes:UP000000589}; KW WD repeat {ECO:0000256|PROSITE-ProRule:PRU00221}. FT DOMAIN 313 441 WD_REPEATS_REGION. FT {ECO:0000259|PROSITE:PS50294}. CC -------------------------------------------------------------------------- CC The following FT lines are automated annotations from the MyHits database. CC -------------------------------------------------------------------------- FT MYHIT 306 345 ismart:WD40 [T] FT MYHIT 320 345 ipfam:WD40 [T] FT MYHIT 393 432 ismart:WD40 [T] FT MYHIT 441 484 ismart:WD40 [T] FT MYHIT 204 238 ismart:WD40 [T] FT MYHIT 313 441 iprf:WD_REPEATS_REGION [T] FT MYHIT 350 388 ismart:WD40 [T] FT MYHIT 42 86 ismart:WD40 [T] SQ SEQUENCE 549 AA; 61655 MW; AE6E955A4FEDCDC1 CRC64; MGHKYSVAQT DHSVGLAGFS LPGKPGIPLQ GPPLSVRFFF FFRIPVHTIF DSCPEGNGMR SIAITRDSKF LATISDSATQ KVCIWKWTLA VETPACTLEL PKEYGFQDNL VFNPANNKEL VSNSKTQAIY YCWFEDKGIL AHSAPVLTEK TFNKLVGKFS QSVFHLKLPQ VLSATKEGKL VVWDIHYPSS TSSSAISAFP FIKPRKLVHL QKEAITVLMT IDSYIVTGDI KGNIKFYDHT LSVVNWYSNF KLGAIRTLSF SKTIPSLPTE KSNLPTDCTL RGDLFVVRNF IIGTFDATVY HMTVDGTKLE KLFVEPRDAV YAVSCHPYQP LIAVGSVCGM IKVWDFEKKV YLFSRTFEKG LGVQCLTYNP EGALLGAGFT EGTVYILDAM SLENESPEPF KYSKSSVSHC CFSHDSNYMA TADVNFTVAV YMVVVKNGQR VWEYLARLRS HQNSIQSLLF GVHLDSNEPR LLSLGKDRFL IEYNLVKSCK DHLDVLDVHR TDQGNYPTCM IWYPPLTKEL FLLICNSGYK VKLFNATTKM CRSCLSICI // |