Entry euk:B1N738_DANRE

ID   B1N738_DANRE            Unreviewed;       234 AA.
AC   B1N738;
DT   29-APR-2008, integrated into UniProtKB/TrEMBL.
DT   29-APR-2008, sequence version 1.
DT   10-MAY-2017, entry version 61.
DE   SubName: Full=Interleukin 15 receptor alpha isoform 3 {ECO:0000313|EMBL:ABO15450.1};
DE   SubName: Full=Zgc:195175 {ECO:0000313|Ensembl:ENSDARP00000100003};
GN   Name=IL-15RA {ECO:0000313|EMBL:ABO15450.1};
GN   ORFNames=zgc:195175 {ECO:0000313|Ensembl:ENSDARP00000100003,
GN   ECO:0000313|ZFIN:ZDB-GENE-081022-191};
OS   Danio rerio (Zebrafish) (Brachydanio rerio).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
OX   NCBI_TaxID=7955;
RN   [1] {ECO:0000313|EMBL:ABO15450.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Shao J., Fang W., Xiang L.;
RT   "Identification and characterization of a putative CD25 molecule from
RT   teleost fish.";
RL   Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSDARP00000100003}
RP   IDENTIFICATION.
RC   STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000100003};
RG   Ensembl;
RL   Submitted (FEB-2012) to UniProtKB.
RN   [3] {ECO:0000313|Ensembl:ENSDARP00000100003, ECO:0000313|Proteomes:UP000000437}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000100003,
RC   ECO:0000313|Proteomes:UP000000437};
RX   PubMed=23594743; DOI=10.1038/nature12111;
RA   Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA   Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA   McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA   Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA   Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA   Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA   Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA   Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA   Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA   Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA   Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA   Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA   Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA   Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA   Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA   Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA   Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA   Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA   Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA   Saunders D., Wallis J., Babbage A., Hammond S.,
RA   Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA   Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA   Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA   Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA   Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA   Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA   Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA   Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA   Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA   Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA   Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA   Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA   Stemple D.L.;
RT   "The zebrafish reference genome sequence and its relationship to the
RT   human genome.";
RL   Nature 496:498-503(2013).
CC   -!- CAUTION: Lacks conserved residue(s) required for the propagation
CC       of feature annotation. {ECO:0000256|PROSITE-ProRule:PRU00302}.
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DR   EMBL; BX511192; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; EF165722; ABO15450.1; -; mRNA.
DR   RefSeq; XP_005164854.1; XM_005164797.2.
DR   UniGene; Dr.126047; -.
DR   STRING; 7955.ENSDARP00000099117; -.
DR   Ensembl; ENSDART00000111416; ENSDARP00000100003; ENSDARG00000069311.
DR   GeneID; 100192216; -.
DR   ZFIN; ZDB-GENE-081022-191; zgc:195175.
DR   HOVERGEN; HBG101360; -.
DR   Proteomes; UP000000437; Chromosome 4.
DR   Bgee; ENSDARG00000069311; -.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   InterPro; IPR000436; Sushi_SCR_CCP_dom.
DR   Pfam; PF00084; Sushi; 1.
DR   SUPFAM; SSF57535; SSF57535; 1.
DR   PROSITE; PS50923; SUSHI; 1.
PE   2: Evidence at transcript level;
KW   Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW   Disulfide bond {ECO:0000256|SAAS:SAAS00597225};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Receptor {ECO:0000313|EMBL:ABO15450.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000437};
KW   Sushi {ECO:0000256|PROSITE-ProRule:PRU00302};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    151    171       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN       23     88       Sushi (CCP/SCR).
FT                                {ECO:0000259|PROSITE:PS50923}.
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CC   The following FT lines are automated annotations from the MyHits database.
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FT   MYHIT        23     88       iprf:SUSHI [T]
FT   MYHIT        25     86       ipfam:Sushi [T]
SQ   SEQUENCE   234 AA;  25420 MW;  A1419A82778A40CF CRC64;
     MYMLVILIFV TSAYQHNIAR ASDLCGPPKK ALNTEPVTGN YSLNSSIRIQ CVAGYVRKVG
     TSNLIRCLKE HDKDKPSWTS ALPLVCIPDP KNKKAPRPDH QFTSSTTEIN TPTISGTSTS
     ITGISLSVKT TANMTANSKV EPSFARSKST IGGVTSIFIL CLAATLFILW WRSRRRDYTN
     VIVLQLTNQD AVYSDIPVSV IAPNPNNASI DSTAVIGTNH PQADSVQDSD SIHL
//