ID B0S7J2_DANRE Unreviewed; 195 AA.
AC B0S7J2;
DT 08-APR-2008, integrated into UniProtKB/TrEMBL.
DT 08-APR-2008, sequence version 1.
DT 15-MAR-2017, entry version 48.
DE SubName: Full=Zgc:193538 {ECO:0000313|Ensembl:ENSDARP00000116503};
GN ORFNames=zgc:193538 {ECO:0000313|Ensembl:ENSDARP00000116503,
GN ECO:0000313|ZFIN:ZDB-GENE-041111-206};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000116503, ECO:0000313|Proteomes:UP000000437};
RN [1] {ECO:0000313|Ensembl:ENSDARP00000116503, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000116503,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
RN [2] {ECO:0000313|Ensembl:ENSDARP00000116503}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000116503};
RG Ensembl;
RL Submitted (AUG-2013) to UniProtKB.
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSDARP00000116503}.
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DR EMBL; BX855605; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR PaxDb; B0S7J2; -.
DR PeptideAtlas; B0S7J2; -.
DR Ensembl; ENSDART00000134526; ENSDARP00000116503; ENSDARG00000078807.
DR ZFIN; ZDB-GENE-041111-206; zgc:193538.
DR eggNOG; ENOG410IY9E; Eukaryota.
DR eggNOG; ENOG410Y7F5; LUCA.
DR GeneTree; ENSGT00390000000543; -.
DR HOVERGEN; HBG105366; -.
DR Proteomes; UP000000437; Chromosome 5.
DR Bgee; ENSDARG00000078807; -.
DR ExpressionAtlas; B0S7J2; baseline.
DR GO; GO:0006303; P:double-strand break repair via nonhomologous end joining; IEA:InterPro.
DR InterPro; IPR027873; PAXX.
DR Pfam; PF15384; PAXX; 1.
PE 1: Evidence at protein level;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Proteomics identification {ECO:0000213|PeptideAtlas:B0S7J2};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
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CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 12 195 ipfam:PAXX [T]
SQ SEQUENCE 195 AA; 21585 MW; B2C87F8D3DD70AF1 CRC64;
MEQNNSESKS VLCTLLDKND QSKYVFFTQK LPAGVINIGF TNGEDVWKTH LSEEILSQLF
KKFSLKSTED YTFKIKCACK TGRAFVKLLE DSAVLHLGAE ATDLSLSLAK LTDSEGRMEV
KDLLFKMADS LQQLDSASSS FSPGKGYQKR SAEFEPKKQH KGPVVAVKKR LPGDSLINPG
TKRKKPATGV AFDDE
//
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