ID A9JTG0_DANRE Unreviewed; 352 AA.
AC A9JTG0;
DT 05-FEB-2008, integrated into UniProtKB/TrEMBL.
DT 05-FEB-2008, sequence version 1.
DT 10-MAY-2017, entry version 72.
DE SubName: Full=Early growth response 4 {ECO:0000313|Ensembl:ENSDARP00000102334};
DE SubName: Full=Zgc:175128 protein {ECO:0000313|EMBL:AAI55327.1};
GN Name=egr4 {ECO:0000313|Ensembl:ENSDARP00000102334,
GN ECO:0000313|ZFIN:ZDB-GENE-080204-90};
GN ORFNames=zgc:175128 {ECO:0000313|EMBL:AAI55327.1};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|EMBL:AAI55327.1};
RN [1] {ECO:0000313|EMBL:AAI55327.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo {ECO:0000313|EMBL:AAI55327.1};
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000102334}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000102334};
RG Ensembl;
RL Submitted (FEB-2012) to UniProtKB.
RN [3] {ECO:0000313|Ensembl:ENSDARP00000102334, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000102334,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
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DR EMBL; CU681841; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC155326; AAI55327.1; -; mRNA.
DR RefSeq; NP_001107925.1; NM_001114453.1.
DR UniGene; Dr.83618; -.
DR STRING; 7955.ENSDARP00000102334; -.
DR Ensembl; ENSDART00000110381; ENSDARP00000102334; ENSDARG00000077799.
DR GeneID; 795099; -.
DR KEGG; dre:795099; -.
DR CTD; 1961; -.
DR ZFIN; ZDB-GENE-080204-90; egr4.
DR eggNOG; KOG1721; Eukaryota.
DR eggNOG; COG5048; LUCA.
DR GeneTree; ENSGT00550000074455; -.
DR HOGENOM; HOG000205187; -.
DR HOVERGEN; HBG100309; -.
DR OrthoDB; EOG091G06VX; -.
DR TreeFam; TF318980; -.
DR Proteomes; UP000000437; Chromosome 23.
DR Bgee; ENSDARG00000077799; -.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR InterPro; IPR013087; Znf_C2H2_type.
DR SMART; SM00355; ZnF_C2H2; 3.
DR SUPFAM; SSF57667; SSF57667; 2.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 3.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 3.
PE 2: Evidence at transcript level;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT DOMAIN 250 279 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 280 307 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 308 335 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 280 307 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 280 302 ismart:ZnF_C2H2 [T]
FT MYHIT 252 274 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 250 274 ismart:ZnF_C2H2 [T]
FT MYHIT 282 302 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 310 330 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 308 330 ismart:ZnF_C2H2 [T]
FT MYHIT 250 279 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 308 335 iprf:ZINC_FINGER_C2H2_2 [T]
SQ SEQUENCE 352 AA; 38477 MW; 24AB6D1BE5707A86 CRC64;
MLNTVDFSAL DLLCAQTLPQ PAPHCQPDAA CGLLKPKAEP VDAGFPDCSC DGFPPSPLTY
TGSFYTESGP CSTDALLNIL TEIVGISDNF CGNSRAGALS RQESLLSTGS SLGSPESLCN
DSSDEFADTS AQQLAFPAIK SEFGSSCSGG DLFDGFCTSS HEPSDLDDII DLLSPLGPET
DSVLDTWIKQ EPLDFQLPVA PAPSHENSLY ISFPNAFGLA DALDSLLATN THAQRSKPRA
RKGAAREKPF SCPVESCERR FSRSDELNRH VRIHTGHKPF QCRVCLRCFS RSDHLTTHMR
THTGEKPFSC DVCARRFARS DERKRHMRVH LKQRERMQQK TELLGACAFS LV
//
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