ID A8KC33_DANRE Unreviewed; 377 AA.
AC A8KC33;
DT 04-DEC-2007, integrated into UniProtKB/TrEMBL.
DT 04-DEC-2007, sequence version 1.
DT 10-MAY-2017, entry version 69.
DE SubName: Full=Zgc:174563 protein {ECO:0000313|EMBL:AAI54340.1};
DE SubName: Full=Zinc finger protein 1154 {ECO:0000313|Ensembl:ENSDARP00000137114};
GN Name=znf1154 {ECO:0000313|Ensembl:ENSDARP00000137114,
GN ECO:0000313|ZFIN:ZDB-GENE-080218-28};
GN ORFNames=zgc:174563 {ECO:0000313|EMBL:AAI54340.1};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|EMBL:AAI54340.1};
RN [1] {ECO:0000313|EMBL:AAI54340.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=Singapore local strain {ECO:0000313|EMBL:AAI54340.1};
RC TISSUE=Embryo {ECO:0000313|EMBL:AAI54340.1};
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000137114, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000137114,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
RN [3] {ECO:0000313|Ensembl:ENSDARP00000137114}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000137114};
RG Ensembl;
RL Submitted (NOV-2015) to UniProtKB.
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DR EMBL; BX640576; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BX649416; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC154339; AAI54340.1; -; mRNA.
DR RefSeq; XP_017208856.1; XM_017353367.1.
DR UniGene; Dr.132683; -.
DR STRING; 7955.ENSDARP00000097345; -.
DR Ensembl; ENSDART00000169318; ENSDARP00000137114; ENSDARG00000100882.
DR GeneID; 100006786; -.
DR CTD; 100006786; -.
DR ZFIN; ZDB-GENE-080218-28; znf1154.
DR eggNOG; KOG1721; Eukaryota.
DR eggNOG; COG5048; LUCA.
DR GeneTree; ENSGT00800000124383; -.
DR HOGENOM; HOG000234617; -.
DR HOVERGEN; HBG018163; -.
DR OrthoDB; EOG091G02KC; -.
DR TreeFam; TF334420; -.
DR Proteomes; UP000000437; Chromosome 22.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR InterPro; IPR013087; Znf_C2H2_type.
DR SMART; SM00355; ZnF_C2H2; 11.
DR SUPFAM; SSF57667; SSF57667; 6.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 10.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 11.
PE 2: Evidence at transcript level;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT DOMAIN 62 89 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 90 117 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 118 145 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 146 173 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 174 201 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 202 229 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 230 257 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 258 285 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 286 313 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 314 341 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 342 369 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 344 364 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 62 84 ismart:ZnF_C2H2 [T]
FT MYHIT 174 196 ismart:ZnF_C2H2 [T]
FT MYHIT 90 117 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 258 280 ismart:ZnF_C2H2 [T]
FT MYHIT 92 112 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 342 364 ismart:ZnF_C2H2 [T]
FT MYHIT 146 173 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 176 196 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 120 140 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 260 280 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 118 140 ismart:ZnF_C2H2 [T]
FT MYHIT 232 252 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 230 252 ismart:ZnF_C2H2 [T]
FT MYHIT 202 229 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 230 257 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 316 336 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 64 84 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 202 222 ismart:ZnF_C2H2 [T]
FT MYHIT 146 168 ismart:ZnF_C2H2 [T]
FT MYHIT 90 112 ismart:ZnF_C2H2 [T]
FT MYHIT 286 313 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 342 369 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 314 341 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 286 308 ismart:ZnF_C2H2 [T]
FT MYHIT 258 285 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 314 336 ismart:ZnF_C2H2 [T]
FT MYHIT 288 308 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 174 201 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 62 89 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 118 145 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 148 168 ipat:ZINC_FINGER_C2H2_1 [T]
SQ SEQUENCE 377 AA; 44220 MW; 5E8406BEF16783E7 CRC64;
MSDPEPCRIK QEETEELIDV MVKEEREDLS EDEEKHQVKS EEETRIKIDH NFLMETTAVK
DFTCTQCGKS FSQKYNLNVH MRIHTGEQPY KCSHCDMRFH CARNLKSHEM LHTGEKPHKC
DHCSKTFIRA TDLKMHLRVH TKEKPYSCSV CGKSFTQTSS LRKHEKIHTG VREFVCFECG
KSFIKAGDLK RHQMIHTGEK PYKCSHCDLR FRYLGHLKAH QMNLTSEEQL ACTQCGKSFR
QLTKLNRHML IHTGERPHKC DQCCKTFLKA SGLKKHLRVH TNERPYSCSV CGNRFTQASS
LRKHQHIHTG VREFVCSECE KSFITAGDLR RHQMIHTGEK PYKCSHCDKR FRRSERLKAH
EITHREKHTN AISFAHQ
//
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