ID A8KB54_DANRE Unreviewed; 508 AA.
AC A8KB54;
DT 04-DEC-2007, integrated into UniProtKB/TrEMBL.
DT 04-DEC-2007, sequence version 1.
DT 10-MAY-2017, entry version 77.
DE SubName: Full=Zgc:171570 protein {ECO:0000313|EMBL:AAI53972.1};
DE SubName: Full=Zinc finger protein 1014 {ECO:0000313|Ensembl:ENSDARP00000091841};
GN Name=znf1014 {ECO:0000313|Ensembl:ENSDARP00000091841,
GN ECO:0000313|ZFIN:ZDB-GENE-080220-9};
GN ORFNames=zgc:171570 {ECO:0000313|EMBL:AAI53972.1};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|EMBL:AAI53972.1};
RN [1] {ECO:0000313|EMBL:AAI53972.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Ovary {ECO:0000313|EMBL:AAI53972.1};
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000091841}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000091841};
RG Ensembl;
RL Submitted (FEB-2012) to UniProtKB.
RN [3] {ECO:0000313|Ensembl:ENSDARP00000091841, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000091841,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
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DR EMBL; CABZ01064858; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CABZ01064859; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC153971; AAI53972.1; -; mRNA.
DR RefSeq; NP_001108370.1; NM_001114898.1.
DR RefSeq; XP_017212884.1; XM_017357395.1.
DR UniGene; Dr.43322; -.
DR Ensembl; ENSDART00000101067; ENSDARP00000091841; ENSDARG00000101562.
DR GeneID; 100141333; -.
DR KEGG; dre:100141333; -.
DR CTD; 100141333; -.
DR ZFIN; ZDB-GENE-080220-9; znf1014.
DR GeneTree; ENSGT00870000136910; -.
DR HOGENOM; HOG000234617; -.
DR HOVERGEN; HBG018163; -.
DR OrthoDB; EOG091G02KC; -.
DR Proteomes; UP000000437; Chromosome 2.
DR Bgee; ENSDARG00000015482; -.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 3.30.40.10; -; 3.
DR InterPro; IPR013087; Znf_C2H2_type.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR SMART; SM00355; ZnF_C2H2; 16.
DR SUPFAM; SSF57667; SSF57667; 8.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 16.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 16.
PE 2: Evidence at transcript level;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT DOMAIN 64 91 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 92 119 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 120 147 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 148 175 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 176 203 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 204 231 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 232 259 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 260 287 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 288 315 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 316 343 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 344 371 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 372 399 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 400 427 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 428 455 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 456 483 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 484 508 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 400 427 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 372 394 ismart:ZnF_C2H2 [T]
FT MYHIT 148 170 ismart:ZnF_C2H2 [T]
FT MYHIT 234 254 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 402 422 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 346 366 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 66 86 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 94 114 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 316 338 ismart:ZnF_C2H2 [T]
FT MYHIT 288 310 ismart:ZnF_C2H2 [T]
FT MYHIT 484 508 ismart:ZnF_C2H2 [T]
FT MYHIT 232 259 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 92 114 ismart:ZnF_C2H2 [T]
FT MYHIT 178 198 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 428 450 ismart:ZnF_C2H2 [T]
FT MYHIT 64 86 ismart:ZnF_C2H2 [T]
FT MYHIT 206 226 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 458 478 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 204 226 ismart:ZnF_C2H2 [T]
FT MYHIT 486 508 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 176 198 ismart:ZnF_C2H2 [T]
FT MYHIT 316 343 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 290 310 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 260 282 ismart:ZnF_C2H2 [T]
FT MYHIT 120 147 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 176 203 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 260 287 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 456 483 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 428 455 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 92 119 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 374 394 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 430 450 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 372 399 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 232 254 ismart:ZnF_C2H2 [T]
FT MYHIT 122 142 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 64 91 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 484 508 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 344 366 ismart:ZnF_C2H2 [T]
FT MYHIT 150 170 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 318 338 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 120 142 ismart:ZnF_C2H2 [T]
FT MYHIT 204 231 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 148 175 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 456 478 ismart:ZnF_C2H2 [T]
FT MYHIT 400 422 ismart:ZnF_C2H2 [T]
FT MYHIT 262 282 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 344 371 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 288 315 iprf:ZINC_FINGER_C2H2_2 [T]
SQ SEQUENCE 508 AA; 58269 MW; 08E2C35D91151868 CRC64;
MWSCDGVKKI IKEEQENTGD TEEHRALMIV KEEEREIKEE EEEGCQDGAV GETQSQPADT
ETVFTCPQCG KSFRKKHYLK QHIGIHIGLK PFACAECGKS FRIKSSLEVH MRLHTGEKPF
TCSLCGKSFR RSGTFDDHQR IHFEEKPFTC DECGKSFKWA NCLQIHKLIH SGEKPFGCDQ
CGKRYIQKSE LRDHMMSHTN EKPYSCEFCG KGFARLCRFR HHQKTHTGVN EYSCTDCGQT
FTTFTLLKAH QKIHTEKRPY KCAFCQKTFK QSGAFKKHHR IHSEEKPFAC DECGKSFKWE
NSLQIHKLIH SGEKQFSCDQ CGKKFVQKSD LKTHMMSHTG EKPYSCAVCG KGFVRLSVFK
NHQKAHAGVK EFVCSDCGKA FTTSTLLNAH QKIHTGEKPY KCSYCEKSFT SSGSLQGHER
IHTGEKPYTC DECGKSFKWR RSLQIHKLIH SGEKPFDCDQ CGKTFVQKSD LRTHLMSHSG
EKPYSCTVCG KGFVRLCFLK MHLEKNAH
//
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