MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | SubName: Full=Zinc finger protein 532 {ECO:0000313|Ensembl:ENSDARP00000078470}; |
 |
|
| MyHits synonyms | A8E7H6_DANRE , A8E7H6 , 80A30C20DB844C9E |
 Legends: 1, C2H2-type. {ECO:0000259|PROSITE:PS50157}; 2, iprf:ZINC_FINGER_C2H2_2 [T]; 3, ipat:ZINC_FINGER_C2H2_1 [T]; 4, ismart:ZnF_C2H2 [T].
| |
ID A8E7H6_DANRE Unreviewed; 1294 AA.
AC A8E7H6;
DT 13-NOV-2007, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2007, sequence version 1.
DT 10-MAY-2017, entry version 72.
DE SubName: Full=Zinc finger protein 532 {ECO:0000313|Ensembl:ENSDARP00000078470};
GN Name=znf532 {ECO:0000313|Ensembl:ENSDARP00000078470,
GN ECO:0000313|ZFIN:ZDB-GENE-060531-40};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000078470, ECO:0000313|Proteomes:UP000000437};
RN [1] {ECO:0000313|Ensembl:ENSDARP00000120865}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000120865};
RG Ensembl;
RL Submitted (FEB-2012) to UniProtKB.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000078470, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000078470,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
RN [3] {ECO:0000313|Ensembl:ENSDARP00000078470}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000078470};
RG Ensembl;
RL Submitted (AUG-2013) to UniProtKB.
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSDARP00000078470}.
CC -----------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution-NoDerivs License
CC -----------------------------------------------------------------------
DR EMBL; BX248399; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_005161130.1; XM_005161073.3.
DR RefSeq; XP_005161132.1; XM_005161075.3.
DR RefSeq; XP_005161133.1; XM_005161076.3.
DR RefSeq; XP_017208507.1; XM_017353018.1.
DR RefSeq; XP_017208508.1; XM_017353019.1.
DR RefSeq; XP_017208509.1; XM_017353020.1.
DR RefSeq; XP_017208510.1; XM_017353021.1.
DR RefSeq; XP_017208511.1; XM_017353022.1.
DR UniGene; Dr.82838; -.
DR STRING; 7955.ENSDARP00000120865; -.
DR Ensembl; ENSDART00000084035; ENSDARP00000078470; ENSDARG00000052894.
DR Ensembl; ENSDART00000146248; ENSDARP00000120865; ENSDARG00000052894.
DR GeneID; 559908; -.
DR KEGG; dre:559908; -.
DR CTD; 55205; -.
DR ZFIN; ZDB-GENE-060531-40; znf532.
DR eggNOG; KOG1721; Eukaryota.
DR eggNOG; COG5048; LUCA.
DR GeneTree; ENSGT00530000063261; -.
DR HOGENOM; HOG000010306; -.
DR HOVERGEN; HBG062228; -.
DR OMA; FQSHVTK; -.
DR OrthoDB; EOG091G0AA1; -.
DR TreeFam; TF329009; -.
DR Proteomes; UP000000437; Chromosome 21.
DR Bgee; ENSDARG00000052894; -.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 3.30.40.10; -; 2.
DR InterPro; IPR013087; Znf_C2H2_type.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR SMART; SM00355; ZnF_C2H2; 15.
DR SUPFAM; SSF57667; SSF57667; 4.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 8.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 11.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT DOMAIN 597 615 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 731 761 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 760 787 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 819 842 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 847 875 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 882 909 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 913 941 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 1012 1040 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 1042 1070 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 1204 1232 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 1257 1279 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 731 761 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 760 787 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 1206 1227 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 847 870 ismart:ZnF_C2H2 [T]
FT MYHIT 1042 1065 ismart:ZnF_C2H2 [T]
FT MYHIT 847 875 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 913 936 ismart:ZnF_C2H2 [T]
FT MYHIT 849 870 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 882 904 ismart:ZnF_C2H2 [T]
FT MYHIT 884 904 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 882 909 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 1175 1197 ismart:ZnF_C2H2 [T]
FT MYHIT 731 751 ismart:ZnF_C2H2 [T]
FT MYHIT 1257 1279 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 913 941 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 597 615 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 821 842 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 597 617 ismart:ZnF_C2H2 [T]
FT MYHIT 1072 1098 ismart:ZnF_C2H2 [T]
FT MYHIT 1042 1070 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 1257 1279 ismart:ZnF_C2H2 [T]
FT MYHIT 819 842 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 1044 1065 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 819 842 ismart:ZnF_C2H2 [T]
FT MYHIT 915 936 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 1012 1040 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 788 812 ismart:ZnF_C2H2 [T]
FT MYHIT 1259 1279 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 1204 1232 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 760 782 ismart:ZnF_C2H2 [T]
FT MYHIT 1012 1035 ismart:ZnF_C2H2 [T]
FT MYHIT 1204 1227 ismart:ZnF_C2H2 [T]
FT MYHIT 625 649 ismart:ZnF_C2H2 [T]
FT MYHIT 762 784 ipat:ZINC_FINGER_C2H2_1 [T]
SQ SEQUENCE 1294 AA; 141328 MW; 80A30C20DB844C9E CRC64;
MGDMKTPDFD DLLAAFDIPD MVDPKAAIES GHDDHEGQLK HNAHHEEDSH ATSGPDVGVS
VIVKNVRNFD ASEHLSEKDV HPTVGNGLRN GFLPVSPNNR YRKESDKLQK GEIHGMAGNI
STFNQFSPIS SAEEFDDDDK IEVDDPADKQ SHLSFRPNPL TGSGAKMEEP RSQHIKADCA
SRPRTNGNCH KLKVENGSTN GKVGHAKLHD SQKPRKNQEE HSKETSTSQE AKEPAEPVIE
LSVTNFSQAK AKSSAKLSSC IAAIAALSAK KASTETVPPE SIATTRDSPR EAKEIPKVTE
KSLDQESALE LSRKVLTKQP DSPSSVTSES SSKESPASPA GSIPVIPKVR IKTIKTSSGQ
IKRTVTRVLP EFDPDGLKKG VDSSSNVVSS LLSSSTSPSV FSSPTRTTLP TTVVATSGGS
AIEVTKQMTI KPVATAFLPV SAVKTAGSQV INLKLANNTT VKATVIPAAS VQSASSAILK
AANAIQQQTV MVPASSLTNT KLVPKTVHLT NLNLLPQNPS SAELHQALTK PQQPIKQALL
AQQQQKKVSR VQVLTSSQSS VVEAFNKVLS SINPVPVYVP NLSPPTSACI SLPSRGYKCL
ECGDSFALEK SLTQHYDRRS VRIEVTCNHC TKNLVFYNKC SLLSHARGHK DKGVVMQCSH
LILKPIPADQ MILVPSVTSS APTSSANLGS LIAGSQGKGN STTVISAPSS APVVAAMPLD
KDASRVCRSN LKCLECNETF QEESALVMHY QQAPESSGQK TCTICQMLLP NQCSFASHQR
IHQHKSPYIC PECGAICRSV HFQSHVTKNC LHYTRRVGYR CVHCSVIFAD VAALKSHIQG
SHCEIFYKCP ICPMAFKSAP GAHSHAYTQH PGVKIGEPKL IYKCSMCDTV FTQQTLLYTH
FDQHISSQKV SVFKCPDCSV HYAQKQLMLD HIKSMHGTLK TIEGPPNLGI NLPLSSKPTN
SLSPNNNSNN KESSSISNLE KGEKKPVSPT KKSSNGTDIP KKPPPSTSCP GWNCRDCDRL
FTQREVYISH MKREHGKQLK KHPCRQCEKS FSSSHSLCRH NRIKHKGLRK VYSCPHCPDP
SRTFTKRLLL EKHIHLMHTV KETEDKLPAD SSSNEATAEK EQVPSPKRKL HSEDEDADGQ
EDVEEPKGDV TSCQRPKGSS LQPLKKLKIN VFKTHKCAVC SFTTEDIVRF HEHIPQHKTD
VSSFQCRECG LCYTSHHSLS RHLFIVHKLK EPQGFGRHNG QQENTPNPED NGGIPDTQCK
VCSKTFDTEG ALNTHMRTHG MAFIKSKRLS AAEK
//
| |