ID A8DZB8_DANRE Unreviewed; 145 AA.
AC A8DZB8;
DT 13-NOV-2007, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2007, sequence version 1.
DT 10-MAY-2017, entry version 69.
DE SubName: Full=Zinc finger protein 1175 {ECO:0000313|Ensembl:ENSDARP00000112804};
GN Name=znf1175 {ECO:0000313|Ensembl:ENSDARP00000112804,
GN ECO:0000313|ZFIN:ZDB-GENE-050420-13};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000112804, ECO:0000313|Proteomes:UP000000437};
RN [1] {ECO:0000313|Ensembl:ENSDARP00000112804, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000112804,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
RN [2] {ECO:0000313|Ensembl:ENSDARP00000112804}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000112804};
RG Ensembl;
RL Submitted (AUG-2013) to UniProtKB.
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSDARP00000112804}.
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DR EMBL; AL929017; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR ProteinModelPortal; A8DZB8; -.
DR STRING; 7955.ENSDARP00000112804; -.
DR PaxDb; A8DZB8; -.
DR Ensembl; ENSDART00000132489; ENSDARP00000112804; ENSDARG00000095667.
DR ZFIN; ZDB-GENE-050420-13; znf1175.
DR eggNOG; KOG1721; Eukaryota.
DR eggNOG; COG5048; LUCA.
DR GeneTree; ENSGT00870000136648; -.
DR HOVERGEN; HBG018163; -.
DR InParanoid; A8DZB8; -.
DR OMA; VHARENP; -.
DR OrthoDB; EOG091G083V; -.
DR PhylomeDB; A8DZB8; -.
DR TreeFam; TF328277; -.
DR Proteomes; UP000000437; Chromosome 22.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 3.30.40.10; -; 2.
DR InterPro; IPR013087; Znf_C2H2_type.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR SMART; SM00355; ZnF_C2H2; 3.
DR SUPFAM; SSF57667; SSF57667; 2.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 3.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 3.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT DOMAIN 62 89 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 90 117 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 118 145 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
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CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 64 84 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 90 117 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 62 89 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 120 140 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 92 112 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 118 140 ismart:ZnF_C2H2 [T]
FT MYHIT 118 145 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 62 84 ismart:ZnF_C2H2 [T]
FT MYHIT 90 112 ismart:ZnF_C2H2 [T]
SQ SEQUENCE 145 AA; 17063 MW; 8F005EE66CC28B69 CRC64;
MSDPEPCRIK QEQTEELIDV MVKEESEELS EDEEKHRIKS EEETHTNTED SFSGNITAVN
GFTCTQCGKS LRHKYDLSRH MRIHTGERPY KCSHCDKTFR YSGHVKIHER IHTRETAFTC
AQCGKTYLRP YELKLHLRVH ARENP
//
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