MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
Description | SubName: Full=Zgc:153738 {ECO:0000313|Ensembl:ENSDARP00000105398}; |
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MyHits synonyms | A5PF14_DANRE , A5PF14 , 561647377328782A |
![]() Legends: 1, AAA. {ECO:0000259|SMART:SM00382}; 2, iprf:IQ [T]; 3, ipfam:IQ [T].
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ID A5PF14_DANRE Unreviewed; 818 AA. AC A5PF14; DT 10-JUL-2007, integrated into UniProtKB/TrEMBL. DT 10-JUL-2007, sequence version 1. DT 10-MAY-2017, entry version 75. DE SubName: Full=Zgc:153738 {ECO:0000313|Ensembl:ENSDARP00000105398}; GN ORFNames=zgc:153738 {ECO:0000313|Ensembl:ENSDARP00000105398, GN ECO:0000313|ZFIN:ZDB-GENE-061013-622}; OS Danio rerio (Zebrafish) (Brachydanio rerio). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000105398, ECO:0000313|Proteomes:UP000000437}; RN [1] {ECO:0000313|Ensembl:ENSDARP00000105398, ECO:0000313|Proteomes:UP000000437} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000105398, RC ECO:0000313|Proteomes:UP000000437}; RX PubMed=23594743; DOI=10.1038/nature12111; RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T., RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G., RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P., RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D., RA Saunders D., Wallis J., Babbage A., Hammond S., RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., RA Stemple D.L.; RT "The zebrafish reference genome sequence and its relationship to the RT human genome."; RL Nature 496:498-503(2013). RN [2] {ECO:0000313|Ensembl:ENSDARP00000105398} RP IDENTIFICATION. RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000105398}; RG Ensembl; RL Submitted (AUG-2013) to UniProtKB. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSDARP00000105398}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AL844185; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR RefSeq; NP_001073437.3; NM_001079968.3. DR UniGene; Dr.123845; -. DR ProteinModelPortal; A5PF14; -. DR STRING; 7955.ENSDARP00000105398; -. DR PaxDb; A5PF14; -. DR Ensembl; ENSDART00000129535; ENSDARP00000105398; ENSDARG00000069230. DR GeneID; 558115; -. DR KEGG; dre:558115; -. DR ZFIN; ZDB-GENE-061013-622; zgc:153738. DR eggNOG; KOG0740; Eukaryota. DR eggNOG; COG0464; LUCA. DR GeneTree; ENSGT00570000078874; -. DR HOGENOM; HOG000285934; -. DR HOVERGEN; HBG067609; -. DR InParanoid; A5PF14; -. DR OMA; MVEKEFS; -. DR OrthoDB; EOG091G03C2; -. DR PhylomeDB; A5PF14; -. DR TreeFam; TF324350; -. DR Proteomes; UP000000437; Chromosome 8. DR Bgee; ENSDARG00000069230; -. DR ExpressionAtlas; A5PF14; baseline. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR InterPro; IPR003593; AAA+_ATPase. DR InterPro; IPR003959; ATPase_AAA_core. DR InterPro; IPR000048; IQ_motif_EF-hand-BS. DR InterPro; IPR027417; P-loop_NTPase. DR Pfam; PF00004; AAA; 1. DR Pfam; PF00612; IQ; 1. DR SMART; SM00382; AAA; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR PROSITE; PS50096; IQ; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000000437}; KW Reference proteome {ECO:0000313|Proteomes:UP000000437}. FT DOMAIN 555 694 AAA. {ECO:0000259|SMART:SM00382}. CC -------------------------------------------------------------------------- CC The following FT lines are automated annotations from the MyHits database. CC -------------------------------------------------------------------------- FT MYHIT 205 233 iprf:IQ [T] FT MYHIT 555 694 ismart:AAA [T] FT MYHIT 559 678 ipfam:AAA [T] FT MYHIT 207 223 ipfam:IQ [T] SQ SEQUENCE 818 AA; 94522 MW; 561647377328782A CRC64; MSHSTYNSLW SEAHEELSCL LPQELPEEPI RPERDRVVFF QRIATFYVRY VQIFRHLEEA YDQSVHPQKR RVIRQVLDSV MGRVLELKNE MVEKEFSEYH YMDDVIQDLK LTPEDLEIPI PRYFIRERNK VLQDRERMFA AILNQMDVME KSGPPVMRML TLERTIKVIQ VAERARQGRL RAKFMREIHR DSERQKRADI ETVSSDQAAV CIQKVWRGFM QRKITKRLRE EEMIFLGMAL DPKLSYPSQT ELIAQNNKAL RRTRQEEHED DYQKSIGSVV HQLREVEGSE MKETMKDQIR QWFIECRDAT GSFPDYPEEE DGGSALIFAE KTPEELAEEL AAKEEEDANK NPKGKEDTKE KAKKGKIEDE EEEPGLKMLP SACLPDLERS HKTYSEVWKN RNESKNFSQR HELELIKEDK RKEIEVEIRK QVDELMRQEL ANWKLAVDKE KSGKVKGAAK KKKASKSAKR KKKDKDLTAD RTTESLFEEL VEQELLKKPE NVKLKDYLGD YSYLGTTLRQ SDIEPMPSLS DVRQVVALYA ILPLGSQAVH EKSPLVKTIL LVGPSGVGKK MLVHAICQET GANLFDLSPL NVAKKYPGRN GLQMMLHLVF KVARLMQPSV IWIGDAEKMF YRKVPKEEKE LDPKRLKKDL PKILKSIRGE DCVLIVGTTS DPHSADLKSL CKFYNKIILI PRPDYASRYV MWKELIKKNG GEVTGDLDLS SLAKISDGYT QGHMVQVVRS ILTERRIQQF PKRPLTASEF VSPLARIDPV FQEEEEALKN WYAKTPLGKK RIKAASGKEG DEEPPKTGGK AGKKKGKK // |