ID A3KNN6_DANRE Unreviewed; 443 AA.
AC A3KNN6;
DT 03-APR-2007, integrated into UniProtKB/TrEMBL.
DT 03-APR-2007, sequence version 1.
DT 10-MAY-2017, entry version 85.
DE SubName: Full=Diphthamide biosynthesis 7 {ECO:0000313|Ensembl:ENSDARP00000083772};
DE SubName: Full=Zgc:162277 protein {ECO:0000313|EMBL:AAI33931.1};
GN Name=dph7 {ECO:0000313|Ensembl:ENSDARP00000083772,
GN ECO:0000313|ZFIN:ZDB-GENE-070410-57};
GN Synonyms=wdr85 {ECO:0000313|ZFIN:ZDB-GENE-070410-57},
GN zgc:162277 {ECO:0000313|EMBL:AAI33931.1};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|EMBL:AAI33931.1};
RN [1] {ECO:0000313|EMBL:AAI33931.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Ovary {ECO:0000313|EMBL:AAI33931.1};
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000083772}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000083772};
RG Ensembl;
RL Submitted (FEB-2012) to UniProtKB.
RN [3] {ECO:0000313|Ensembl:ENSDARP00000083772, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000083772,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
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DR EMBL; BX855605; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC133930; AAI33931.1; -; mRNA.
DR RefSeq; NP_001076308.1; NM_001082839.1.
DR UniGene; Dr.82410; -.
DR STRING; 7955.ENSDARP00000083772; -.
DR Ensembl; ENSDART00000089339; ENSDARP00000083772; ENSDARG00000062083.
DR GeneID; 564032; -.
DR KEGG; dre:564032; -.
DR CTD; 92715; -.
DR ZFIN; ZDB-GENE-070410-57; dph7.
DR eggNOG; KOG0280; Eukaryota.
DR eggNOG; ENOG4111MMJ; LUCA.
DR GeneTree; ENSGT00390000018644; -.
DR HOGENOM; HOG000240907; -.
DR HOVERGEN; HBG080322; -.
DR KO; K17868; -.
DR OMA; ILDMKWL; -.
DR OrthoDB; EOG091G060U; -.
DR TreeFam; TF324407; -.
DR Proteomes; UP000000437; Chromosome 5.
DR Bgee; ENSDARG00000062083; -.
DR Gene3D; 2.130.10.10; -; 1.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR017986; WD40_repeat_dom.
DR SMART; SM00320; WD40; 2.
DR SUPFAM; SSF50978; SSF50978; 2.
DR PROSITE; PS00678; WD_REPEATS_1; 2.
DR PROSITE; PS50082; WD_REPEATS_2; 1.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 2: Evidence at transcript level;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437};
KW WD repeat {ECO:0000256|PROSITE-ProRule:PRU00221}.
FT DOMAIN 187 272 WD_REPEATS_REGION.
FT {ECO:0000259|PROSITE:PS50294}.
FT REPEAT 230 272 WD. {ECO:0000256|PROSITE-
FT ProRule:PRU00221}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 230 272 iprf:WD_REPEATS_2 [T]
FT MYHIT 250 264 ipat:WD_REPEATS_1 [T]
FT MYHIT 205 219 ipat:WD_REPEATS_1 [T]
FT MYHIT 187 272 iprf:WD_REPEATS_REGION [T]
FT MYHIT 223 263 ismart:WD40 [T]
FT MYHIT 178 218 ismart:WD40 [T]
SQ SEQUENCE 443 AA; 49204 MW; 267687BE25E29613 CRC64;
MGWQSRTRTL QVFDTELTAD TVEWCPIPQW AHVLACGTYQ QLLEGDDKQR TEGSAAPSRI
GRLYLFDCNP QSSFIPPLTE SQRIDTAAIL DLKWCHVPIS ERPLLGMATA SGEIQLYKLI
EAQQGSSGLE CELSTDLGPD RLALSLDWST GRGESSDVRV VSSDSTGSLT LLSLGEADLT
AVCQWKAHEY EAWISAFSYW DTQTVYSGGD DSKLKGWDLR MGCSSPTFTS KRHTMGVCSI
HSNPHREHIL ATGSYDENVL LWDGRNMKQP LSETAVGGGV WRLKWHPSQE HLLLAACMHN
DFQILYCQKA LEGQETPCPV LGSYILHNSL AYGADWSRLP VSSSAPPSPQ EPPQTSSGLV
ESTGHLRIQY ESPTASFDTS LEDDSGRYIP DQCPSPEKSS VSDLFTSDAR DSVSCLIATC
SFYDHMMHVW RWDWSPEEKH ESL
//
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