MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | SubName: Full=Pyruvate dehydrogenase kinase, isozyme 3b {ECO:0000313|Ensembl:ENSDARP00000137073}; SubName: Full=Zgc:158702 {ECO:0000313|EMBL:AAI29395.1}; SubName: Full=Zgc:158702 protein {ECO:0000313|EMBL:AAI65303.1}; |
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| MyHits synonyms | A1L284_DANRE , A1L284 , C268522252B58C49 |
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ID A1L284_DANRE Unreviewed; 176 AA.
AC A1L284;
DT 06-FEB-2007, integrated into UniProtKB/TrEMBL.
DT 06-FEB-2007, sequence version 1.
DT 10-MAY-2017, entry version 70.
DE SubName: Full=Pyruvate dehydrogenase kinase, isozyme 3b {ECO:0000313|Ensembl:ENSDARP00000137073};
DE SubName: Full=Zgc:158702 {ECO:0000313|EMBL:AAI29395.1};
DE SubName: Full=Zgc:158702 protein {ECO:0000313|EMBL:AAI65303.1};
GN Name=pdk3b {ECO:0000313|Ensembl:ENSDARP00000137073,
GN ECO:0000313|ZFIN:ZDB-GENE-070112-1892};
GN Synonyms=zgc:158702 {ECO:0000313|EMBL:AAI29395.1};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|EMBL:AAI29395.1};
RN [1] {ECO:0000313|EMBL:AAI29395.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Olfactory epithelium {ECO:0000313|EMBL:AAI29395.1};
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:AAI65303.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=PCR rescue {ECO:0000313|EMBL:AAI65303.1};
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|Ensembl:ENSDARP00000137073, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000137073,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
RN [4] {ECO:0000313|Ensembl:ENSDARP00000137073}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000137073};
RG Ensembl;
RL Submitted (NOV-2015) to UniProtKB.
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DR EMBL; CU062645; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC129394; AAI29395.1; -; mRNA.
DR EMBL; BC165303; AAI65303.1; -; mRNA.
DR RefSeq; NP_001074157.1; NM_001080688.1.
DR UniGene; Dr.110553; -.
DR STRING; 7955.ENSDARP00000110197; -.
DR Ensembl; ENSDART00000161584; ENSDARP00000137073; ENSDARG00000099791.
DR GeneID; 791206; -.
DR KEGG; dre:791206; -.
DR CTD; 791206; -.
DR ZFIN; ZDB-GENE-070112-1892; pdk3b.
DR eggNOG; KOG0787; Eukaryota.
DR eggNOG; COG0642; LUCA.
DR GeneTree; ENSGT00550000074574; -.
DR HOGENOM; HOG000213998; -.
DR HOVERGEN; HBG095214; -.
DR Reactome; R-DRE-204174; Regulation of pyruvate dehydrogenase (PDH) complex.
DR Reactome; R-DRE-5362517; Signaling by Retinoic Acid.
DR Proteomes; UP000000437; Chromosome 21.
DR Gene3D; 1.20.140.20; -; 1.
DR InterPro; IPR018955; BCDHK/PDK_N.
DR Pfam; PF10436; BCDHK_Adom3; 1.
DR SUPFAM; SSF69012; SSF69012; 1.
PE 2: Evidence at transcript level;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT DOMAIN 25 168 BCDHK_Adom3. {ECO:0000259|Pfam:PF10436}.
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CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 25 168 ipfam:BCDHK_Adom3 [T]
SQ SEQUENCE 176 AA; 21017 MW; C268522252B58C49 CRC64;
MKLFICLLKD VTHKIEYYSR FSPSPMSIKQ FLDFGRENAC EKTSYMFLRK ELAVRLANTM
REVTLLPDSL QIQPSVKLVE SWYSQSFEEL LKFEKRSPED PHTLNDFLEM LIKIRNRHND
VVPTMAQGVI EYKEKFGFDP FISSNVQYFL DRFYTNRISF RMLINQHSET PRNHVM
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