MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
Description | SubName: Full=Zgc:158260 {ECO:0000313|EMBL:AAI27572.1, ECO:0000313|Ensembl:ENSDARP00000131396}; |
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MyHits synonyms | A0PJQ6_DANRE , A0PJQ6 , 7B7EC65FC036EEA5 |
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ID A0PJQ6_DANRE Unreviewed; 364 AA. AC A0PJQ6; DT 09-JAN-2007, integrated into UniProtKB/TrEMBL. DT 09-JAN-2007, sequence version 1. DT 10-MAY-2017, entry version 70. DE SubName: Full=Zgc:158260 {ECO:0000313|EMBL:AAI27572.1, ECO:0000313|Ensembl:ENSDARP00000131396}; GN ORFNames=zgc:158260 {ECO:0000313|EMBL:AAI27572.1, GN ECO:0000313|Ensembl:ENSDARP00000131396, GN ECO:0000313|ZFIN:ZDB-GENE-061201-24}; OS Danio rerio (Zebrafish) (Brachydanio rerio). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. OX NCBI_TaxID=7955 {ECO:0000313|EMBL:AAI27572.1}; RN [1] {ECO:0000313|EMBL:AAI27572.1} RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. RC TISSUE=Kidney {ECO:0000313|EMBL:AAI27572.1}; RG NIH - Zebrafish Gene Collection (ZGC) project; RL Submitted (NOV-2006) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Ensembl:ENSDARP00000131396, ECO:0000313|Proteomes:UP000000437} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000131396, RC ECO:0000313|Proteomes:UP000000437}; RX PubMed=23594743; DOI=10.1038/nature12111; RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T., RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G., RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P., RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D., RA Saunders D., Wallis J., Babbage A., Hammond S., RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., RA Stemple D.L.; RT "The zebrafish reference genome sequence and its relationship to the RT human genome."; RL Nature 496:498-503(2013). RN [3] {ECO:0000313|Ensembl:ENSDARP00000131396} RP IDENTIFICATION. RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000131396}; RG Ensembl; RL Submitted (NOV-2015) to UniProtKB. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CU929506; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; BC127571; AAI27572.1; -; mRNA. DR RefSeq; NP_001073522.1; NM_001080053.1. DR UniGene; Dr.88429; -. DR Ensembl; ENSDART00000169305; ENSDARP00000131396; ENSDARG00000101703. DR GeneID; 571389; -. DR KEGG; dre:571389; -. DR ZFIN; ZDB-GENE-061201-24; zgc:158260. DR eggNOG; ENOG410IID3; Eukaryota. DR eggNOG; ENOG410XRNG; LUCA. DR GeneTree; ENSGT00400000022396; -. DR HOGENOM; HOG000041286; -. DR HOVERGEN; HBG095736; -. DR OMA; CEWITSL; -. DR OrthoDB; EOG091G0IPV; -. DR TreeFam; TF340932; -. DR Proteomes; UP000000437; Chromosome 5. DR InterPro; IPR032743; FAM47. DR Pfam; PF14642; FAM47; 1. PE 2: Evidence at transcript level; KW Complete proteome {ECO:0000313|Proteomes:UP000000437}; KW Reference proteome {ECO:0000313|Proteomes:UP000000437}. CC -------------------------------------------------------------------------- CC The following FT lines are automated annotations from the MyHits database. CC -------------------------------------------------------------------------- FT MYHIT 29 152 ipfam:FAM47 [T] SQ SEQUENCE 364 AA; 42417 MW; 7B7EC65FC036EEA5 CRC64; MENFKFPRFR EHHKPKYIRD LRQKQQLSGS LDSHRWCFLS PGLDDFRDHY PTVYKVPFTQ CKCALSPVVF GLLNHACSVK LQRKKLSKNQ VCYSKQNLQS QTQREFIDAV EHKLKQHPLA LYPHLESGMI PELFEQVLSV LDPDMCMKGE LSLTKKTEKH LEDRRAKCEV STQEILKRST SIKSPKDESK DTRARNAYKW QELKEIDKEY QTANAKQSQE DKQMFVKFFC EWITSLGGET SDLRESTILD LFKSDYEKKT TLTLPINKIA HQPSGKCHSS VKEHFKDHCV KELTEAYKPK ILKTAYDSPK ALADVKRNLH FEPSKQNKEL KQIHGIHAFR EFIINKGVRM PRVISDNIGS PYSS // |