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MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
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Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7

DescriptionSubName: Full=Zgc:158260 {ECO:0000313|EMBL:AAI27572.1, ECO:0000313|Ensembl:ENSDARP00000131396};
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MyHits synonymsA0PJQ6_DANRE , A0PJQ6 , 7B7EC65FC036EEA5
match map segment
ipfam:FAM47  
ID   A0PJQ6_DANRE            Unreviewed;       364 AA.
AC   A0PJQ6;
DT   09-JAN-2007, integrated into UniProtKB/TrEMBL.
DT   09-JAN-2007, sequence version 1.
DT   10-MAY-2017, entry version 70.
DE   SubName: Full=Zgc:158260 {ECO:0000313|EMBL:AAI27572.1, ECO:0000313|Ensembl:ENSDARP00000131396};
GN   ORFNames=zgc:158260 {ECO:0000313|EMBL:AAI27572.1,
GN   ECO:0000313|Ensembl:ENSDARP00000131396,
GN   ECO:0000313|ZFIN:ZDB-GENE-061201-24};
OS   Danio rerio (Zebrafish) (Brachydanio rerio).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
OX   NCBI_TaxID=7955 {ECO:0000313|EMBL:AAI27572.1};
RN   [1] {ECO:0000313|EMBL:AAI27572.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   TISSUE=Kidney {ECO:0000313|EMBL:AAI27572.1};
RG   NIH - Zebrafish Gene Collection (ZGC) project;
RL   Submitted (NOV-2006) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSDARP00000131396, ECO:0000313|Proteomes:UP000000437}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000131396,
RC   ECO:0000313|Proteomes:UP000000437};
RX   PubMed=23594743; DOI=10.1038/nature12111;
RA   Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA   Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA   McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA   Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA   Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA   Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA   Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA   Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA   Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA   Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA   Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA   Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA   Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA   Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA   Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA   Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA   Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA   Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA   Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA   Saunders D., Wallis J., Babbage A., Hammond S.,
RA   Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA   Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA   Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA   Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA   Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA   Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA   Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA   Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA   Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA   Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA   Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA   Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA   Stemple D.L.;
RT   "The zebrafish reference genome sequence and its relationship to the
RT   human genome.";
RL   Nature 496:498-503(2013).
RN   [3] {ECO:0000313|Ensembl:ENSDARP00000131396}
RP   IDENTIFICATION.
RC   STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000131396};
RG   Ensembl;
RL   Submitted (NOV-2015) to UniProtKB.
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DR   EMBL; CU929506; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; BC127571; AAI27572.1; -; mRNA.
DR   RefSeq; NP_001073522.1; NM_001080053.1.
DR   UniGene; Dr.88429; -.
DR   Ensembl; ENSDART00000169305; ENSDARP00000131396; ENSDARG00000101703.
DR   GeneID; 571389; -.
DR   KEGG; dre:571389; -.
DR   ZFIN; ZDB-GENE-061201-24; zgc:158260.
DR   eggNOG; ENOG410IID3; Eukaryota.
DR   eggNOG; ENOG410XRNG; LUCA.
DR   GeneTree; ENSGT00400000022396; -.
DR   HOGENOM; HOG000041286; -.
DR   HOVERGEN; HBG095736; -.
DR   OMA; CEWITSL; -.
DR   OrthoDB; EOG091G0IPV; -.
DR   TreeFam; TF340932; -.
DR   Proteomes; UP000000437; Chromosome 5.
DR   InterPro; IPR032743; FAM47.
DR   Pfam; PF14642; FAM47; 1.
PE   2: Evidence at transcript level;
KW   Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000437}.
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CC   The following FT lines are automated annotations from the MyHits database.
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FT   MYHIT        29    152       ipfam:FAM47 [T]
SQ   SEQUENCE   364 AA;  42417 MW;  7B7EC65FC036EEA5 CRC64;
     MENFKFPRFR EHHKPKYIRD LRQKQQLSGS LDSHRWCFLS PGLDDFRDHY PTVYKVPFTQ
     CKCALSPVVF GLLNHACSVK LQRKKLSKNQ VCYSKQNLQS QTQREFIDAV EHKLKQHPLA
     LYPHLESGMI PELFEQVLSV LDPDMCMKGE LSLTKKTEKH LEDRRAKCEV STQEILKRST
     SIKSPKDESK DTRARNAYKW QELKEIDKEY QTANAKQSQE DKQMFVKFFC EWITSLGGET
     SDLRESTILD LFKSDYEKKT TLTLPINKIA HQPSGKCHSS VKEHFKDHCV KELTEAYKPK
     ILKTAYDSPK ALADVKRNLH FEPSKQNKEL KQIHGIHAFR EFIINKGVRM PRVISDNIGS
     PYSS
//