MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | SubName: Full=Zinc finger protein 1015 {ECO:0000313|Ensembl:ENSDARP00000143220}; |
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| MyHits synonyms | A0A1L1QZU2_DANRE , A0A1L1QZU2 , 59151260A474D0B1 |
 Legends: 1, C2H2-type. {ECO:0000259|PROSITE:PS50157}; 2, iprf:ZINC_FINGER_C2H2_2 [T]; 3, ismart:ZnF_C2H2 [T]; 4, ipat:ZINC_FINGER_C2H2_1 [T].
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ID A0A1L1QZU2_DANRE Unreviewed; 433 AA.
AC A0A1L1QZU2;
DT 15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2017, sequence version 1.
DT 10-MAY-2017, entry version 4.
DE SubName: Full=Zinc finger protein 1015 {ECO:0000313|Ensembl:ENSDARP00000143220};
GN Name=znf1015 {ECO:0000313|Ensembl:ENSDARP00000143220,
GN ECO:0000313|ZFIN:ZDB-GENE-050913-139};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000143220, ECO:0000313|Proteomes:UP000000437};
RN [1] {ECO:0000313|Ensembl:ENSDARP00000143220, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000143220,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
RN [2] {ECO:0000313|Ensembl:ENSDARP00000143220}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000143220};
RG Ensembl;
RL Submitted (DEC-2016) to UniProtKB.
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSDARP00000143220}.
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DR EMBL; CU570689; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR Ensembl; ENSDART00000174295; ENSDARP00000143220; ENSDARG00000074298.
DR ZFIN; ZDB-GENE-050913-139; znf1015.
DR GeneTree; ENSGT00840000130819; -.
DR Proteomes; UP000000437; Chromosome 4.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR InterPro; IPR013087; Znf_C2H2_type.
DR SMART; SM00355; ZnF_C2H2; 12.
DR SUPFAM; SSF57667; SSF57667; 7.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 11.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 12.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT DOMAIN 75 102 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 103 130 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 131 158 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 159 186 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 187 214 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 215 242 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 243 270 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 270 297 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 298 325 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 326 353 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 354 381 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 382 410 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
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CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 103 130 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 326 348 ismart:ZnF_C2H2 [T]
FT MYHIT 243 270 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 77 97 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 131 158 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 133 153 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 215 242 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 243 265 ismart:ZnF_C2H2 [T]
FT MYHIT 384 405 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 298 320 ismart:ZnF_C2H2 [T]
FT MYHIT 105 125 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 159 186 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 382 410 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 131 153 ismart:ZnF_C2H2 [T]
FT MYHIT 270 297 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 189 209 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 215 237 ismart:ZnF_C2H2 [T]
FT MYHIT 217 237 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 382 404 ismart:ZnF_C2H2 [T]
FT MYHIT 159 181 ismart:ZnF_C2H2 [T]
FT MYHIT 328 348 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 354 381 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 300 320 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 270 292 ismart:ZnF_C2H2 [T]
FT MYHIT 161 181 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 187 214 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 75 102 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 298 325 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 356 376 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 103 125 ismart:ZnF_C2H2 [T]
FT MYHIT 272 292 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 354 376 ismart:ZnF_C2H2 [T]
FT MYHIT 187 209 ismart:ZnF_C2H2 [T]
FT MYHIT 326 353 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 75 97 ismart:ZnF_C2H2 [T]
SQ SEQUENCE 433 AA; 50248 MW; 59151260A474D0B1 CRC64;
MAFVKEESEG LRITEVFTLK HEDPEEQTEL MMLKEETQEL DEVEENDLHE EHQDLRTAEP
SSMTKNTLAE KTKSFPCHQC GKHFSRKQSL KVHMRIHTGE NLSTCDQCGK SFNTKSGFDK
HMKTHSGEKP FWCTECGRSF CKKYTLEMHM AVHTGEKPFA CEHCEKKFRQ MGNLKAHYRV
HTGEKPYTCQ QCGKSFTKKT TLRSHIISHS GEKPFTCDQC GKSYACKDHL DRHMRIHTKD
KYFICDQCGS SFKLKENFDQ HMKNHAEKSL ICEQCGRSFF CEATYEKHMR VHTGEKPYSC
TECGKSFSQK ENLTSHMRIH TGEKPFACEY CEKRFSQLPA LKVHMRVHTG EKPYTCAQCG
KGFAQKNGLK IHMRTHTGER PYTCTQCGKS FISKETQIRH MKTHHTGTKP FACEDVERDL
DVKFPQPTHE DSH
//
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