MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
Description | SubName: Full=Zinc finger protein 1015 {ECO:0000313|Ensembl:ENSDARP00000143055}; Flags: Fragment; |
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MyHits synonyms | A0A1L1QZD7_DANRE , A0A1L1QZD7 , 4632184056A334D5 |
![]() Legends: 1, NON_TER {ECO:0000313|Ensembl:ENSDARP00000143055}; 2, C2H2-type. {ECO:0000259|PROSITE:PS50157}; 3, iprf:ZINC_FINGER_C2H2_2 [T]; 4, ismart:ZnF_C2H2 [T]; 5, ipat:ZINC_FINGER_C2H2_1 [T].
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ID A0A1L1QZD7_DANRE Unreviewed; 186 AA. AC A0A1L1QZD7; DT 15-FEB-2017, integrated into UniProtKB/TrEMBL. DT 15-FEB-2017, sequence version 1. DT 10-MAY-2017, entry version 4. DE SubName: Full=Zinc finger protein 1015 {ECO:0000313|Ensembl:ENSDARP00000143055}; DE Flags: Fragment; GN Name=znf1015 {ECO:0000313|Ensembl:ENSDARP00000143055, GN ECO:0000313|ZFIN:ZDB-GENE-050913-139}; OS Danio rerio (Zebrafish) (Brachydanio rerio). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000143055, ECO:0000313|Proteomes:UP000000437}; RN [1] {ECO:0000313|Ensembl:ENSDARP00000143055, ECO:0000313|Proteomes:UP000000437} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000143055, RC ECO:0000313|Proteomes:UP000000437}; RX PubMed=23594743; DOI=10.1038/nature12111; RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T., RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G., RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P., RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D., RA Saunders D., Wallis J., Babbage A., Hammond S., RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., RA Stemple D.L.; RT "The zebrafish reference genome sequence and its relationship to the RT human genome."; RL Nature 496:498-503(2013). RN [2] {ECO:0000313|Ensembl:ENSDARP00000143055} RP IDENTIFICATION. RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000143055}; RG Ensembl; RL Submitted (DEC-2016) to UniProtKB. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSDARP00000143055}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CU570689; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR Ensembl; ENSDART00000174327; ENSDARP00000143055; ENSDARG00000074298. DR ZFIN; ZDB-GENE-050913-139; znf1015. DR GeneTree; ENSGT00840000130819; -. DR Proteomes; UP000000437; Chromosome 4. DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro. DR InterPro; IPR013087; Znf_C2H2_type. DR SMART; SM00355; ZnF_C2H2; 4. DR SUPFAM; SSF57667; SSF57667; 2. DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 4. DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 4. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000000437}; KW Reference proteome {ECO:0000313|Proteomes:UP000000437}. FT DOMAIN 70 97 C2H2-type. {ECO:0000259|PROSITE:PS50157}. FT DOMAIN 98 125 C2H2-type. {ECO:0000259|PROSITE:PS50157}. FT DOMAIN 126 153 C2H2-type. {ECO:0000259|PROSITE:PS50157}. FT DOMAIN 154 181 C2H2-type. {ECO:0000259|PROSITE:PS50157}. FT NON_TER 186 186 {ECO:0000313|Ensembl:ENSDARP00000143055}. CC -------------------------------------------------------------------------- CC The following FT lines are automated annotations from the MyHits database. CC -------------------------------------------------------------------------- FT MYHIT 98 125 iprf:ZINC_FINGER_C2H2_2 [T] FT MYHIT 126 148 ismart:ZnF_C2H2 [T] FT MYHIT 154 181 iprf:ZINC_FINGER_C2H2_2 [T] FT MYHIT 154 176 ismart:ZnF_C2H2 [T] FT MYHIT 70 97 iprf:ZINC_FINGER_C2H2_2 [T] FT MYHIT 128 148 ipat:ZINC_FINGER_C2H2_1 [T] FT MYHIT 100 120 ipat:ZINC_FINGER_C2H2_1 [T] FT MYHIT 70 92 ismart:ZnF_C2H2 [T] FT MYHIT 72 92 ipat:ZINC_FINGER_C2H2_1 [T] FT MYHIT 126 153 iprf:ZINC_FINGER_C2H2_2 [T] FT MYHIT 156 176 ipat:ZINC_FINGER_C2H2_1 [T] FT MYHIT 98 120 ismart:ZnF_C2H2 [T] SQ SEQUENCE 186 AA; 21604 MW; 4632184056A334D5 CRC64; MTSLKEESED LRITEVFTLK HEDPEEQTGL MVLKEEAQVL NEIEEKDQCG KHQDSMTDEP SERAEKTKSF PCHQCGKHFS RKQSLKVHMR IHTGENLSTC DQCGKSFNTK SGFDKHMKTH SGEKPFWCTE CGRSFCKKYT LEMHMAVHTG EKPFACEHCE KKFRQMGNLK AHYRVHTGEK PYTCQQ // |