MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | SubName: Full=Cold-regulated 413 plasma membrane protein 2 {ECO:0000313|EMBL:ONM29196.1}; |
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| MyHits synonyms | A0A1D6MIE7_MAIZE , A0A1D6MIE7 , 2DE73B66607FF5F9 |
 Legends: 1, SANT. {ECO:0000259|Pfam:PF00249}; 2, ipfam:Myb_DNA-binding [T].
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ID A0A1D6MIE7_MAIZE Unreviewed; 245 AA.
AC A0A1D6MIE7;
DT 30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2016, sequence version 1.
DT 10-MAY-2017, entry version 6.
DE SubName: Full=Cold-regulated 413 plasma membrane protein 2 {ECO:0000313|EMBL:ONM29196.1};
GN ORFNames=ZEAMMB73_Zm00001d039559 {ECO:0000313|EMBL:ONM29196.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae;
OC PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae;
OC Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EnsemblPlants:Zm00001d039559_T001, ECO:0000313|Proteomes:UP000007305};
RN [1] {ECO:0000313|EMBL:ONM29196.1, ECO:0000313|Proteomes:UP000007305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B73 {ECO:0000313|Proteomes:UP000007305};
RC TISSUE=Seedling {ECO:0000313|EMBL:ONM29196.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:Zm00001d039559_T001}
RP IDENTIFICATION.
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001d039559_T001};
RG EnsemblPlants;
RL Submitted (OCT-2016) to UniProtKB.
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DR EMBL; CM007649; ONM29196.1; -; Genomic_DNA.
DR EnsemblPlants; Zm00001d039559_T001; Zm00001d039559_T001; Zm00001d039559.
DR Gramene; Zm00001d039559_T001; Zm00001d039559_T001; Zm00001d039559.
DR Proteomes; UP000007305; Chromosome 3.
DR GO; GO:0016021; C:integral component of membrane; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR InterPro; IPR008892; COR413.
DR InterPro; IPR009057; Homeobox-like.
DR InterPro; IPR001005; SANT/Myb.
DR Pfam; PF00249; Myb_DNA-binding; 1.
DR Pfam; PF05562; WCOR413; 1.
DR SUPFAM; SSF46689; SSF46689; 1.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000007305};
KW Reference proteome {ECO:0000313|Proteomes:UP000007305}.
FT DOMAIN 130 165 SANT. {ECO:0000259|Pfam:PF00249}.
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CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 130 165 ipfam:Myb_DNA-binding [T]
FT MYHIT 163 231 ipfam:WCOR413 [T]
SQ SEQUENCE 245 AA; 27526 MW; 2DE73B66607FF5F9 CRC64;
MWQQGVQDNV EQMKDKQTAT LDDVLASAQV DSCNTDGAST IVASSSRGSY AQHKCKMNKH
KLRKLQKRLC RRHESSLLSS SRPCFGGRRP RSHQASAELS WSMERDYSSM GSEMPGKKAR
KPYTITKPHE RWSTEEHARF VDALLMFGRD WKKIEEHVGT KTTVQLPGSI ILLTTAAPSL
FAHTFRDDLV GVFICLAIGC YLLQEHIRAS DGLRNAFRKG NGMSNSIGIL PLFIYPVWTG
VLQIL
//
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