MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
Description | SubName: Full=Cold-regulated 413 inner membrane protein 2 chloroplastic {ECO:0000313|EMBL:AQK88555.1}; |
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MyHits synonyms | A0A1D6MCZ2_MAIZE , A0A1D6MCZ2 , 052EA9AF3159E7C3 |
![]() Legends: 1, TRANSMEM Helical. {ECO:0000256|SAM:Phobius}.
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ID A0A1D6MCZ2_MAIZE Unreviewed; 89 AA. AC A0A1D6MCZ2; DT 30-NOV-2016, integrated into UniProtKB/TrEMBL. DT 30-NOV-2016, sequence version 1. DT 12-APR-2017, entry version 5. DE SubName: Full=Cold-regulated 413 inner membrane protein 2 chloroplastic {ECO:0000313|EMBL:AQK88555.1}; GN ORFNames=ZEAMMB73_Zm00001d039039 {ECO:0000313|EMBL:AQK88555.1}; OS Zea mays (Maize). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; OC PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; OC Zea. OX NCBI_TaxID=4577 {ECO:0000313|EnsemblPlants:Zm00001d039039_T005, ECO:0000313|Proteomes:UP000007305}; RN [1] {ECO:0000313|Proteomes:UP000007305} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. B73 {ECO:0000313|Proteomes:UP000007305}; RX PubMed=19965430; DOI=10.1126/science.1178534; RA Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S., RA Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D., RA Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K., RA Fronick C., Courtney B., Rock S.M., Belter E., Du F., Kim K., RA Abbott R.M., Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M., RA Gillam B., Chen W., Yan L., Higginbotham J., Cardenas M., RA Waligorski J., Applebaum E., Phelps L., Falcone J., Kanchi K., RA Thane T., Scimone A., Thane N., Henke J., Wang T., Ruppert J., RA Shah N., Rotter K., Hodges J., Ingenthron E., Cordes M., Kohlberg S., RA Sgro J., Delgado B., Mead K., Chinwalla A., Leonard S., Crouse K., RA Collura K., Kudrna D., Currie J., He R., Angelova A., Rajasekar S., RA Mueller T., Lomeli R., Scara G., Ko A., Delaney K., Wissotski M., RA Lopez G., Campos D., Braidotti M., Ashley E., Golser W., Kim H., RA Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A., Fan C., RA Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T., RA Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L., RA Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P., RA Vaughn M.W., Ying K., Yeh C.-T., Emrich S.J., Jia Y., Kalyanaraman A., RA Hsia A.-P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C., RA Chaparro C., Chia J.-M., Deragon J.-M., Estill J.C., Fu Y., RA Jeddeloh J.A., Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z., RA Nagel D.H., McCann M.C., SanMiguel P., Myers A.M., Nettleton D., RA Nguyen J., Penning B.W., Ponnala L., Schneider K.L., Schwartz D.C., RA Sharma A., Soderlund C., Springer N.M., Sun Q., Wang H., Waterman M., RA Westerman R., Wolfgruber T.K., Yang L., Yu Y., Zhang L., Zhou S., RA Zhu Q., Bennetzen J.L., Dawe R.K., Jiang J., Jiang N., Presting G.G., RA Wessler S.R., Aluru S., Martienssen R.A., Clifton S.W., McCombie W.R., RA Wing R.A., Wilson R.K.; RT "The B73 maize genome: complexity, diversity, and dynamics."; RL Science 326:1112-1115(2009). RN [2] {ECO:0000313|EMBL:AQK88555.1} RP NUCLEOTIDE SEQUENCE. RC TISSUE=Seedling {ECO:0000313|EMBL:AQK88555.1}; RG Maize Genome Sequencing Project; RA Ware D.; RT "Update maize B73 reference genome by single molecule sequencing RT technologies."; RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases. RN [3] {ECO:0000313|EnsemblPlants:Zm00001d039039_T005} RP IDENTIFICATION. RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001d039039_T005}; RG EnsemblPlants; RL Submitted (OCT-2016) to UniProtKB. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM000782; AQK88555.1; -; Genomic_DNA. DR EnsemblPlants; Zm00001d039039_T005; Zm00001d039039_T005; Zm00001d039039. DR Gramene; Zm00001d039039_T005; Zm00001d039039_T005; Zm00001d039039. DR Proteomes; UP000007305; Chromosome 6. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR008892; COR413. DR Pfam; PF05562; WCOR413; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000007305}; KW Membrane {ECO:0000256|SAM:Phobius}; KW Reference proteome {ECO:0000313|Proteomes:UP000007305}; KW Transmembrane {ECO:0000256|SAM:Phobius}; KW Transmembrane helix {ECO:0000256|SAM:Phobius}. FT TRANSMEM 6 27 Helical. {ECO:0000256|SAM:Phobius}. FT TRANSMEM 39 57 Helical. {ECO:0000256|SAM:Phobius}. FT TRANSMEM 69 88 Helical. {ECO:0000256|SAM:Phobius}. CC -------------------------------------------------------------------------- CC The following FT lines are automated annotations from the MyHits database. CC -------------------------------------------------------------------------- FT MYHIT 7 80 ipfam:WCOR413 [T] SQ SEQUENCE 89 AA; 9620 MW; 052EA9AF3159E7C3 CRC64; MFRSTQLFII VGELELPLST MLLVSVAPYQ FMDLRGTQGG AVLSLAIAAY LAFQHFTRVG GPGKAFEQGS IVATLAIICI MIVPLMLLF // |