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Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7

DescriptionSubName: Full=Cold-regulated 413 inner membrane protein 2 chloroplastic {ECO:0000313|EMBL:AQK88555.1};
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MyHits synonymsA0A1D6MCZ2_MAIZE , A0A1D6MCZ2 , 052EA9AF3159E7C3
match map segment
ipfam:WCOR413  
Legends: 1, TRANSMEM Helical. {ECO:0000256|SAM:Phobius}.
ID   A0A1D6MCZ2_MAIZE        Unreviewed;        89 AA.
AC   A0A1D6MCZ2;
DT   30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT   30-NOV-2016, sequence version 1.
DT   12-APR-2017, entry version 5.
DE   SubName: Full=Cold-regulated 413 inner membrane protein 2 chloroplastic {ECO:0000313|EMBL:AQK88555.1};
GN   ORFNames=ZEAMMB73_Zm00001d039039 {ECO:0000313|EMBL:AQK88555.1};
OS   Zea mays (Maize).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae;
OC   PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae;
OC   Zea.
OX   NCBI_TaxID=4577 {ECO:0000313|EnsemblPlants:Zm00001d039039_T005, ECO:0000313|Proteomes:UP000007305};
RN   [1] {ECO:0000313|Proteomes:UP000007305}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. B73 {ECO:0000313|Proteomes:UP000007305};
RX   PubMed=19965430; DOI=10.1126/science.1178534;
RA   Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S.,
RA   Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D.,
RA   Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K.,
RA   Fronick C., Courtney B., Rock S.M., Belter E., Du F., Kim K.,
RA   Abbott R.M., Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M.,
RA   Gillam B., Chen W., Yan L., Higginbotham J., Cardenas M.,
RA   Waligorski J., Applebaum E., Phelps L., Falcone J., Kanchi K.,
RA   Thane T., Scimone A., Thane N., Henke J., Wang T., Ruppert J.,
RA   Shah N., Rotter K., Hodges J., Ingenthron E., Cordes M., Kohlberg S.,
RA   Sgro J., Delgado B., Mead K., Chinwalla A., Leonard S., Crouse K.,
RA   Collura K., Kudrna D., Currie J., He R., Angelova A., Rajasekar S.,
RA   Mueller T., Lomeli R., Scara G., Ko A., Delaney K., Wissotski M.,
RA   Lopez G., Campos D., Braidotti M., Ashley E., Golser W., Kim H.,
RA   Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A., Fan C.,
RA   Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T.,
RA   Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L.,
RA   Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P.,
RA   Vaughn M.W., Ying K., Yeh C.-T., Emrich S.J., Jia Y., Kalyanaraman A.,
RA   Hsia A.-P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C.,
RA   Chaparro C., Chia J.-M., Deragon J.-M., Estill J.C., Fu Y.,
RA   Jeddeloh J.A., Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z.,
RA   Nagel D.H., McCann M.C., SanMiguel P., Myers A.M., Nettleton D.,
RA   Nguyen J., Penning B.W., Ponnala L., Schneider K.L., Schwartz D.C.,
RA   Sharma A., Soderlund C., Springer N.M., Sun Q., Wang H., Waterman M.,
RA   Westerman R., Wolfgruber T.K., Yang L., Yu Y., Zhang L., Zhou S.,
RA   Zhu Q., Bennetzen J.L., Dawe R.K., Jiang J., Jiang N., Presting G.G.,
RA   Wessler S.R., Aluru S., Martienssen R.A., Clifton S.W., McCombie W.R.,
RA   Wing R.A., Wilson R.K.;
RT   "The B73 maize genome: complexity, diversity, and dynamics.";
RL   Science 326:1112-1115(2009).
RN   [2] {ECO:0000313|EMBL:AQK88555.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Seedling {ECO:0000313|EMBL:AQK88555.1};
RG   Maize Genome Sequencing Project;
RA   Ware D.;
RT   "Update maize B73 reference genome by single molecule sequencing
RT   technologies.";
RL   Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EnsemblPlants:Zm00001d039039_T005}
RP   IDENTIFICATION.
RC   STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001d039039_T005};
RG   EnsemblPlants;
RL   Submitted (OCT-2016) to UniProtKB.
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DR   EMBL; CM000782; AQK88555.1; -; Genomic_DNA.
DR   EnsemblPlants; Zm00001d039039_T005; Zm00001d039039_T005; Zm00001d039039.
DR   Gramene; Zm00001d039039_T005; Zm00001d039039_T005; Zm00001d039039.
DR   Proteomes; UP000007305; Chromosome 6.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   InterPro; IPR008892; COR413.
DR   Pfam; PF05562; WCOR413; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000007305};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007305};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM      6     27       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     39     57       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     69     88       Helical. {ECO:0000256|SAM:Phobius}.
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CC   The following FT lines are automated annotations from the MyHits database.
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FT   MYHIT         7     80       ipfam:WCOR413 [T]
SQ   SEQUENCE   89 AA;  9620 MW;  052EA9AF3159E7C3 CRC64;
     MFRSTQLFII VGELELPLST MLLVSVAPYQ FMDLRGTQGG AVLSLAIAAY LAFQHFTRVG
     GPGKAFEQGS IVATLAIICI MIVPLMLLF
//