MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | SubName: Full=Cold-regulated 413 plasma membrane protein 2 {ECO:0000313|EMBL:ONM09772.1}; |
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| MyHits synonyms | A0A1D6L641_MAIZE , A0A1D6L641 , 90955DB7F0C40672 |
 Legends: 1, TRANSMEM Helical. {ECO:0000256|SAM:Phobius}.
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ID A0A1D6L641_MAIZE Unreviewed; 243 AA.
AC A0A1D6L641;
DT 30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2016, sequence version 1.
DT 12-APR-2017, entry version 5.
DE SubName: Full=Cold-regulated 413 plasma membrane protein 2 {ECO:0000313|EMBL:ONM09772.1};
GN ORFNames=ZEAMMB73_Zm00001d034188 {ECO:0000313|EMBL:ONM09772.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae;
OC PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae;
OC Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EnsemblPlants:Zm00001d034188_T002, ECO:0000313|Proteomes:UP000007305};
RN [1] {ECO:0000313|EMBL:ONM09772.1, ECO:0000313|Proteomes:UP000007305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B73 {ECO:0000313|Proteomes:UP000007305};
RC TISSUE=Seedling {ECO:0000313|EMBL:ONM09772.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:Zm00001d034188_T002}
RP IDENTIFICATION.
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001d034188_T002};
RG EnsemblPlants;
RL Submitted (OCT-2016) to UniProtKB.
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DR EMBL; CM007647; ONM09772.1; -; Genomic_DNA.
DR EnsemblPlants; Zm00001d034188_T002; Zm00001d034188_T002; Zm00001d034188.
DR Gramene; Zm00001d034188_T002; Zm00001d034188_T002; Zm00001d034188.
DR Proteomes; UP000007305; Chromosome 1.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR InterPro; IPR008892; COR413.
DR Pfam; PF05562; WCOR413; 2.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000007305};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000007305};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 42 64 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 84 103 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 115 133 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 161 179 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 185 201 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 221 239 Helical. {ECO:0000256|SAM:Phobius}.
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CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 22 70 ipfam:WCOR413 [T]
FT MYHIT 97 230 ipfam:WCOR413 [T]
SQ SEQUENCE 243 AA; 26625 MW; 90955DB7F0C40672 CRC64;
MGKGFASYLA MKTGPEGGDA AAAQQALIDA DLRELGVAAR KLANHAFVLG GGLGFGTSFL
KWLAFLAAVS TVNVLLKPEH GQEVMILLLF RNSWTLLGCW YLLILDRTNW KTNMLTALLV
PYIFFTLPNV LFSLIRGEVG KWIAIIAVIL RLFFPRHFPD WLELPGSIIL LTVVAPSLFA
DSFRGDLVGV FICLVIGCYL LQEHIKASGG FRNAFRKGNG VSNSIGILLL FIYPVWAGVL
QVL
//
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