ID A0A1D6JA87_MAIZE Unreviewed; 880 AA.
AC A0A1D6JA87;
DT 30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2016, sequence version 1.
DT 10-MAY-2017, entry version 6.
DE SubName: Full=Dicer-like 103 {ECO:0000313|EMBL:AQK44776.1};
GN ORFNames=ZEAMMB73_Zm00001d025830 {ECO:0000313|EMBL:AQK44776.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae;
OC PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae;
OC Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EnsemblPlants:Zm00001d025830_T082, ECO:0000313|Proteomes:UP000007305};
RN [1] {ECO:0000313|Proteomes:UP000007305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B73 {ECO:0000313|Proteomes:UP000007305};
RX PubMed=19965430; DOI=10.1126/science.1178534;
RA Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S.,
RA Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D.,
RA Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K.,
RA Fronick C., Courtney B., Rock S.M., Belter E., Du F., Kim K.,
RA Abbott R.M., Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M.,
RA Gillam B., Chen W., Yan L., Higginbotham J., Cardenas M.,
RA Waligorski J., Applebaum E., Phelps L., Falcone J., Kanchi K.,
RA Thane T., Scimone A., Thane N., Henke J., Wang T., Ruppert J.,
RA Shah N., Rotter K., Hodges J., Ingenthron E., Cordes M., Kohlberg S.,
RA Sgro J., Delgado B., Mead K., Chinwalla A., Leonard S., Crouse K.,
RA Collura K., Kudrna D., Currie J., He R., Angelova A., Rajasekar S.,
RA Mueller T., Lomeli R., Scara G., Ko A., Delaney K., Wissotski M.,
RA Lopez G., Campos D., Braidotti M., Ashley E., Golser W., Kim H.,
RA Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A., Fan C.,
RA Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T.,
RA Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L.,
RA Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P.,
RA Vaughn M.W., Ying K., Yeh C.-T., Emrich S.J., Jia Y., Kalyanaraman A.,
RA Hsia A.-P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C.,
RA Chaparro C., Chia J.-M., Deragon J.-M., Estill J.C., Fu Y.,
RA Jeddeloh J.A., Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z.,
RA Nagel D.H., McCann M.C., SanMiguel P., Myers A.M., Nettleton D.,
RA Nguyen J., Penning B.W., Ponnala L., Schneider K.L., Schwartz D.C.,
RA Sharma A., Soderlund C., Springer N.M., Sun Q., Wang H., Waterman M.,
RA Westerman R., Wolfgruber T.K., Yang L., Yu Y., Zhang L., Zhou S.,
RA Zhu Q., Bennetzen J.L., Dawe R.K., Jiang J., Jiang N., Presting G.G.,
RA Wessler S.R., Aluru S., Martienssen R.A., Clifton S.W., McCombie W.R.,
RA Wing R.A., Wilson R.K.;
RT "The B73 maize genome: complexity, diversity, and dynamics.";
RL Science 326:1112-1115(2009).
RN [2] {ECO:0000313|EMBL:AQK44776.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Seedling {ECO:0000313|EMBL:AQK44776.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:Zm00001d025830_T082}
RP IDENTIFICATION.
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001d025830_T082};
RG EnsemblPlants;
RL Submitted (OCT-2016) to UniProtKB.
CC -!- SIMILARITY: Belongs to the helicase family. Dicer subfamily.
CC {ECO:0000256|PROSITE-ProRule:PRU00657}.
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DR EMBL; CM000786; AQK44776.1; -; Genomic_DNA.
DR EMBL; CM000786; AQK44791.1; -; Genomic_DNA.
DR EMBL; CM000786; AQK44803.1; -; Genomic_DNA.
DR EnsemblPlants; Zm00001d025830_T081; Zm00001d025830_T081; Zm00001d025830.
DR EnsemblPlants; Zm00001d025830_T082; Zm00001d025830_T082; Zm00001d025830.
DR EnsemblPlants; Zm00001d025830_T083; Zm00001d025830_T083; Zm00001d025830.
DR Gramene; Zm00001d025830_T081; Zm00001d025830_T081; Zm00001d025830.
DR Gramene; Zm00001d025830_T082; Zm00001d025830_T082; Zm00001d025830.
DR Gramene; Zm00001d025830_T083; Zm00001d025830_T083; Zm00001d025830.
DR Proteomes; UP000007305; Chromosome 10.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016891; F:endoribonuclease activity, producing 5'-phosphomonoesters; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR InterPro; IPR005034; Dicer_dimerisation_dom.
DR InterPro; IPR006935; Helicase/UvrB_N.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR Pfam; PF03368; Dicer_dimer; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF04851; ResIII; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; SSF52540; 2.
DR PROSITE; PS51327; DICER_DSRBF; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 3: Inferred from homology;
KW Complete proteome {ECO:0000313|Proteomes:UP000007305};
KW Reference proteome {ECO:0000313|Proteomes:UP000007305};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00657}.
FT DOMAIN 32 190 Helicase ATP-binding.
FT {ECO:0000259|PROSITE:PS51192}.
FT DOMAIN 359 521 Helicase C-terminal.
FT {ECO:0000259|PROSITE:PS51194}.
FT DOMAIN 544 634 Dicer dsRNA-binding fold.
FT {ECO:0000259|PROSITE:PS51327}.
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CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 544 627 ipfam:Dicer_dimer [T]
FT MYHIT 397 480 ismart:HELICc [T]
FT MYHIT 359 521 iprf:HELICASE_CTER [T]
FT MYHIT 360 478 ipfam:Helicase_C [T]
FT MYHIT 32 190 iprf:HELICASE_ATP_BIND_1 [T]
FT MYHIT 36 190 ipfam:ResIII [T]
FT MYHIT 544 634 iprf:DICER_DSRBF [T]
FT MYHIT 21 236 ismart:DEXDc [T]
SQ SEQUENCE 880 AA; 99747 MW; A1CEDE034993AD74 CRC64;
MSEDEAESSS SGAAASEPKD PRTIARKYQL DLCKRAVDEN IIVYLGTGCG KTHIAVLLMY
ELGHLIRKPS REVCVFLAPT IPLVRQQAMV IADSTNFKVQ RYYGSGKHSR DHQAWEKEMG
EYEVLVMTPQ ILLHNLRHCF IRMDLIALLI FDECHHAQAQ KRHPYAQIMK EFYNNADKHP
RVFGMTASPI IGKGGSNKLT YTKCINSLEE LLNAKVCSVD NVELESVIAS PKVEVYFYGP
VGHSNLTTAY IKELGGYKFQ SECMLRESVC NFNESLKKLK SLWRLHENLI FCLQEVGLFG
ALQAARTFLS SSSVSLDGKG ADINDYANKA MSLLSRDILE GPDADSFDLE TIEEPFFSKK
FAVLINVLSR YRLEENMKCI VFVKRIIVAR VVVQILQNLK CLDFWRCEFL VGCHSGLRNM
SRDKMSSIIE KFSSGEVNLL VATSVGEEGL DIQTCCLVVR FDLPETVNSF IQSRGRARMS
KSKYVFLLER GNHSQEKLLD DYITGEIIMD KEINLRTSND MFNCLEENIY RVNDTGASIS
TACSVSLLHR YCDNLPRDIF FVPSPSFFFV DDVDGIVCKL ILPPNAAFRQ VNGQPCPSKD
EAKRDACLKA CIKLHELGAL TDFLLPGQGS RKIKVSTTNN SESNKDDDES FREELYEMLI
PAVLRPSRCK LDSSFKLHFY YIEFIPIPAD RRYQMFGLFV INRLPEESEK LDVELHLARA
RIVKAGIKYL GKIEFNKEEM ILAHNFQEMF LKVLLDRSEF TPSYILLGND GALDMDSTFY
LLLPIKQKFY GDNMIDWPAV KRCLSSPAFQ DPMGLSLHDS YLPNESLKLL GGTYNKADVI
GSLVYTPHTD LFFFVDAILD GTNAKSELNG ATYAEHFKQR
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