ID A0A1D6JA64_MAIZE Unreviewed; 907 AA.
AC A0A1D6JA64;
DT 30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2016, sequence version 1.
DT 10-MAY-2017, entry version 6.
DE SubName: Full=Dicer-like 103 {ECO:0000313|EMBL:AQK44777.1};
GN ORFNames=ZEAMMB73_Zm00001d025830 {ECO:0000313|EMBL:AQK44777.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae;
OC PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae;
OC Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EnsemblPlants:Zm00001d025830_T059, ECO:0000313|Proteomes:UP000007305};
RN [1] {ECO:0000313|Proteomes:UP000007305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B73 {ECO:0000313|Proteomes:UP000007305};
RX PubMed=19965430; DOI=10.1126/science.1178534;
RA Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S.,
RA Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D.,
RA Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K.,
RA Fronick C., Courtney B., Rock S.M., Belter E., Du F., Kim K.,
RA Abbott R.M., Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M.,
RA Gillam B., Chen W., Yan L., Higginbotham J., Cardenas M.,
RA Waligorski J., Applebaum E., Phelps L., Falcone J., Kanchi K.,
RA Thane T., Scimone A., Thane N., Henke J., Wang T., Ruppert J.,
RA Shah N., Rotter K., Hodges J., Ingenthron E., Cordes M., Kohlberg S.,
RA Sgro J., Delgado B., Mead K., Chinwalla A., Leonard S., Crouse K.,
RA Collura K., Kudrna D., Currie J., He R., Angelova A., Rajasekar S.,
RA Mueller T., Lomeli R., Scara G., Ko A., Delaney K., Wissotski M.,
RA Lopez G., Campos D., Braidotti M., Ashley E., Golser W., Kim H.,
RA Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A., Fan C.,
RA Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T.,
RA Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L.,
RA Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P.,
RA Vaughn M.W., Ying K., Yeh C.-T., Emrich S.J., Jia Y., Kalyanaraman A.,
RA Hsia A.-P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C.,
RA Chaparro C., Chia J.-M., Deragon J.-M., Estill J.C., Fu Y.,
RA Jeddeloh J.A., Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z.,
RA Nagel D.H., McCann M.C., SanMiguel P., Myers A.M., Nettleton D.,
RA Nguyen J., Penning B.W., Ponnala L., Schneider K.L., Schwartz D.C.,
RA Sharma A., Soderlund C., Springer N.M., Sun Q., Wang H., Waterman M.,
RA Westerman R., Wolfgruber T.K., Yang L., Yu Y., Zhang L., Zhou S.,
RA Zhu Q., Bennetzen J.L., Dawe R.K., Jiang J., Jiang N., Presting G.G.,
RA Wessler S.R., Aluru S., Martienssen R.A., Clifton S.W., McCombie W.R.,
RA Wing R.A., Wilson R.K.;
RT "The B73 maize genome: complexity, diversity, and dynamics.";
RL Science 326:1112-1115(2009).
RN [2] {ECO:0000313|EMBL:AQK44777.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Seedling {ECO:0000313|EMBL:AQK44777.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:Zm00001d025830_T059}
RP IDENTIFICATION.
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001d025830_T059};
RG EnsemblPlants;
RL Submitted (OCT-2016) to UniProtKB.
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DR EMBL; CM000786; AQK44777.1; -; Genomic_DNA.
DR EnsemblPlants; Zm00001d025830_T059; Zm00001d025830_T059; Zm00001d025830.
DR Gramene; Zm00001d025830_T059; Zm00001d025830_T059; Zm00001d025830.
DR Proteomes; UP000007305; Chromosome 10.
DR GO; GO:0004525; F:ribonuclease III activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR CDD; cd00593; RIBOc; 1.
DR Gene3D; 1.10.1520.10; -; 2.
DR InterPro; IPR005034; Dicer_dimerisation_dom.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR003100; PAZ_dom.
DR InterPro; IPR000999; RNase_III_dom.
DR Pfam; PF03368; Dicer_dimer; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF02170; PAZ; 1.
DR Pfam; PF00636; Ribonuclease_3; 1.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM00949; PAZ; 1.
DR SMART; SM00535; RIBOc; 1.
DR SUPFAM; SSF101690; SSF101690; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR SUPFAM; SSF69065; SSF69065; 3.
DR PROSITE; PS51327; DICER_DSRBF; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS50821; PAZ; 1.
DR PROSITE; PS50142; RNASE_3_2; 1.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000007305};
KW Reference proteome {ECO:0000313|Proteomes:UP000007305};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00657}.
FT DOMAIN 58 220 Helicase C-terminal.
FT {ECO:0000259|PROSITE:PS51194}.
FT DOMAIN 243 333 Dicer dsRNA-binding fold.
FT {ECO:0000259|PROSITE:PS51327}.
FT DOMAIN 571 635 PAZ. {ECO:0000259|PROSITE:PS50821}.
FT DOMAIN 652 830 RNase III. {ECO:0000259|PROSITE:PS50142}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 58 220 iprf:HELICASE_CTER [T]
FT MYHIT 243 326 ipfam:Dicer_dimer [T]
FT MYHIT 96 179 ismart:HELICc [T]
FT MYHIT 534 657 ipfam:PAZ [T]
FT MYHIT 682 850 ismart:RIBOc [T]
FT MYHIT 652 830 iprf:RNASE_3_2 [T]
FT MYHIT 510 661 ismart:PAZ [T]
FT MYHIT 571 635 iprf:PAZ [T]
FT MYHIT 59 177 ipfam:Helicase_C [T]
FT MYHIT 243 333 iprf:DICER_DSRBF [T]
FT MYHIT 700 830 ipfam:Ribonuclease_3 [T]
SQ SEQUENCE 907 AA; 103423 MW; 4ECB0AD844454105 CRC64;
MQAARTFLSS SSVSLDGKGA DINDYANKAM SLLSRDILEG PDADSFDLET IEEPFFSKKF
AVLINVLSRY RLEENMKCIV FVKRIIVARV VVQILQNLKC LDFWRCEFLV GCHSGLRNMS
RDKMSSIIEK FSSGEVNLLV ATSVGEEGLD IQTCCLVVRF DLPETVNSFI QSRGRARMSK
SKYVFLLERG NHSQEKLLDD YITGEIIMDK EINLRTSNDM FNCLEENIYR VNDTGASIST
ACSVSLLHRY CDNLPRDIFF VPSPSFFFVD DVDGIVCKLI LPPNAAFRQV NGQPCPSKDE
AKRDACLKAC IKLHELGALT DFLLPGQGSR KIKVSTTNNS ESNKDDDESF REELYEMLIP
AVLRPSRCKL DSSFKLHFYY IEFIPIPADR RYQMFGLFVI NRLPEESEKL DVELHLARAR
IVKAGIKYLG KIEFNKEEMI LAHNFQEMFL KVLLDRSEFT PSYILLGNDG ALDMDSTFYL
LLPIKQKFYG DNMIDWPAVK RCLSSPAFQD PMGLSLHDSY LPNESLKLLG GTYNKADVIG
SLVYTPHTDL FFFVDAILDG TNAKSELNGA TYAEHFKQRL HIKLSHPEQP LLKAKQLFCL
RNLLHNRQLE STESEARELM EHFVELPPEL CSLKIIGFSK DMGSSLSLLP SLMYRLENLL
VAIELKDVMS SYFPEASQIS ASGILESLTT ERCLERISLE RLEVLGDAFL KYVVGRHNFI
SYEGLDEGQL TRRRSDIVSN SNLYELSIRR NLQVYIRDQH FEPTQFFALG RPCKVVCNPD
REATLHPKNI DPDRRENCNL RCTKSHHWLH RKTIADVVES LLGVFIVECG FKAAFAFLHW
IGIKVDFENS AFYRVLDASS TNLSLMNYMN ISELEELIGY TFKRKGLLLQ AFVHPSFNKH
SGGCYQV
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