ID A0A1D6JA33_MAIZE Unreviewed; 1347 AA.
AC A0A1D6JA33;
DT 30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2016, sequence version 1.
DT 10-MAY-2017, entry version 6.
DE SubName: Full=Dicer-like 103 {ECO:0000313|EMBL:AQK44807.1};
GN ORFNames=ZEAMMB73_Zm00001d025830 {ECO:0000313|EMBL:AQK44807.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae;
OC PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae;
OC Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EnsemblPlants:Zm00001d025830_T028, ECO:0000313|Proteomes:UP000007305};
RN [1] {ECO:0000313|Proteomes:UP000007305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B73 {ECO:0000313|Proteomes:UP000007305};
RX PubMed=19965430; DOI=10.1126/science.1178534;
RA Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S.,
RA Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D.,
RA Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K.,
RA Fronick C., Courtney B., Rock S.M., Belter E., Du F., Kim K.,
RA Abbott R.M., Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M.,
RA Gillam B., Chen W., Yan L., Higginbotham J., Cardenas M.,
RA Waligorski J., Applebaum E., Phelps L., Falcone J., Kanchi K.,
RA Thane T., Scimone A., Thane N., Henke J., Wang T., Ruppert J.,
RA Shah N., Rotter K., Hodges J., Ingenthron E., Cordes M., Kohlberg S.,
RA Sgro J., Delgado B., Mead K., Chinwalla A., Leonard S., Crouse K.,
RA Collura K., Kudrna D., Currie J., He R., Angelova A., Rajasekar S.,
RA Mueller T., Lomeli R., Scara G., Ko A., Delaney K., Wissotski M.,
RA Lopez G., Campos D., Braidotti M., Ashley E., Golser W., Kim H.,
RA Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A., Fan C.,
RA Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T.,
RA Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L.,
RA Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P.,
RA Vaughn M.W., Ying K., Yeh C.-T., Emrich S.J., Jia Y., Kalyanaraman A.,
RA Hsia A.-P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C.,
RA Chaparro C., Chia J.-M., Deragon J.-M., Estill J.C., Fu Y.,
RA Jeddeloh J.A., Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z.,
RA Nagel D.H., McCann M.C., SanMiguel P., Myers A.M., Nettleton D.,
RA Nguyen J., Penning B.W., Ponnala L., Schneider K.L., Schwartz D.C.,
RA Sharma A., Soderlund C., Springer N.M., Sun Q., Wang H., Waterman M.,
RA Westerman R., Wolfgruber T.K., Yang L., Yu Y., Zhang L., Zhou S.,
RA Zhu Q., Bennetzen J.L., Dawe R.K., Jiang J., Jiang N., Presting G.G.,
RA Wessler S.R., Aluru S., Martienssen R.A., Clifton S.W., McCombie W.R.,
RA Wing R.A., Wilson R.K.;
RT "The B73 maize genome: complexity, diversity, and dynamics.";
RL Science 326:1112-1115(2009).
RN [2] {ECO:0000313|EMBL:AQK44807.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Seedling {ECO:0000313|EMBL:AQK44807.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:Zm00001d025830_T028}
RP IDENTIFICATION.
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001d025830_T028};
RG EnsemblPlants;
RL Submitted (OCT-2016) to UniProtKB.
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DR EMBL; CM000786; AQK44807.1; -; Genomic_DNA.
DR EnsemblPlants; Zm00001d025830_T028; Zm00001d025830_T028; Zm00001d025830.
DR Gramene; Zm00001d025830_T028; Zm00001d025830_T028; Zm00001d025830.
DR Proteomes; UP000007305; Chromosome 10.
DR GO; GO:0004525; F:ribonuclease III activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR CDD; cd00593; RIBOc; 2.
DR Gene3D; 1.10.1520.10; -; 2.
DR InterPro; IPR005034; Dicer_dimerisation_dom.
DR InterPro; IPR014720; dsRBD_dom.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR003100; PAZ_dom.
DR InterPro; IPR000999; RNase_III_dom.
DR Pfam; PF03368; Dicer_dimer; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF02170; PAZ; 1.
DR Pfam; PF00636; Ribonuclease_3; 2.
DR SMART; SM00358; DSRM; 2.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM00949; PAZ; 1.
DR SMART; SM00535; RIBOc; 2.
DR SUPFAM; SSF52540; SSF52540; 1.
DR SUPFAM; SSF69065; SSF69065; 3.
DR PROSITE; PS51327; DICER_DSRBF; 1.
DR PROSITE; PS50137; DS_RBD; 2.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS50821; PAZ; 1.
DR PROSITE; PS00517; RNASE_3_1; 1.
DR PROSITE; PS50142; RNASE_3_2; 2.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000007305};
KW Reference proteome {ECO:0000313|Proteomes:UP000007305};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00657}.
FT DOMAIN 104 266 Helicase C-terminal.
FT {ECO:0000259|PROSITE:PS51194}.
FT DOMAIN 289 379 Dicer dsRNA-binding fold.
FT {ECO:0000259|PROSITE:PS51327}.
FT DOMAIN 617 681 PAZ. {ECO:0000259|PROSITE:PS50821}.
FT DOMAIN 698 876 RNase III. {ECO:0000259|PROSITE:PS50142}.
FT DOMAIN 917 1061 RNase III. {ECO:0000259|PROSITE:PS50142}.
FT DOMAIN 1087 1154 DRBM (double-stranded RNA-binding).
FT {ECO:0000259|PROSITE:PS50137}.
FT DOMAIN 1260 1336 DRBM (double-stranded RNA-binding).
FT {ECO:0000259|PROSITE:PS50137}.
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CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 1088 1153 ismart:DSRM [T]
FT MYHIT 142 225 ismart:HELICc [T]
FT MYHIT 289 379 iprf:DICER_DSRBF [T]
FT MYHIT 556 707 ismart:PAZ [T]
FT MYHIT 917 1061 iprf:RNASE_3_2 [T]
FT MYHIT 932 1084 ismart:RIBOc [T]
FT MYHIT 289 372 ipfam:Dicer_dimer [T]
FT MYHIT 728 896 ismart:RIBOc [T]
FT MYHIT 952 1061 ipfam:Ribonuclease_3 [T]
FT MYHIT 698 876 iprf:RNASE_3_2 [T]
FT MYHIT 580 703 ipfam:PAZ [T]
FT MYHIT 746 876 ipfam:Ribonuclease_3 [T]
FT MYHIT 1260 1336 iprf:DS_RBD [T]
FT MYHIT 105 223 ipfam:Helicase_C [T]
FT MYHIT 617 681 iprf:PAZ [T]
FT MYHIT 952 960 ipat:RNASE_3_1 [T]
FT MYHIT 1261 1335 ismart:DSRM [T]
FT MYHIT 104 266 iprf:HELICASE_CTER [T]
FT MYHIT 1087 1154 iprf:DS_RBD [T]
SQ SEQUENCE 1347 AA; 153481 MW; D22D6B4B0F5192BE CRC64;
MCFEQSECML RESVCNFNES LKKLKSLWRL HENLIFCLQE VGLFGALQAA RTFLSSSSVS
LDGKGADIND YANKAMSLLS RDILEGPDAD SFDLETIEEP FFSKKFAVLI NVLSRYRLEE
NMKCIVFVKR IIVARVVVQI LQNLKCLDFW RCEFLVGCHS GLRNMSRDKM SSIIEKFSSG
EVNLLVATSV GEEGLDIQTC CLVVRFDLPE TVNSFIQSRG RARMSKSKYV FLLERGNHSQ
EKLLDDYITG EIIMDKEINL RTSNDMFNCL EENIYRVNDT GASISTACSV SLLHRYCDNL
PRDIFFVPSP SFFFVDDVDG IVCKLILPPN AAFRQVNGQP CPSKDEAKRD ACLKACIKLH
ELGALTDFLL PGQGSRKIKV STTNNSESNK DDDESFREEL YEMLIPAVLR PSRCKLDSSF
KLHFYYIEFI PIPADRRYQM FGLFVINRLP EESEKLDVEL HLARARIVKA GIKYLGKIEF
NKEEMILAHN FQEMFLKVLL DRSEFTPSYI LLGNDGALDM DSTFYLLLPI KQKFYGDNMI
DWPAVKRCLS SPAFQDPMGL SLHDSYLPNE SLKLLGGTYN KADVIGSLVY TPHTDLFFFV
DAILDGTNAK SELNGATYAE HFKQRLHIKL SHPEQPLLKA KQLFCLRNLL HNRQLESTES
EARELMEHFV ELPPELCSLK IIGFSKDMGS SLSLLPSLMY RLENLLVAIE LKDVMSSYFP
EASQISASGI LESLTTERCL ERISLERLEV LGDAFLKYVV GRHNFISYEG LDEGQLTRRR
SDIVSNSNLY ELSIRRNLQV YIRDQHFEPT QFFALGRPCK VVCNPDREAT LHPKNIDPDR
RENCNLRCTK SHHWLHRKTI ADVVESLLGV FIVECGFKAA FAFLHWIGIK VDFENSAFYR
VLDASSTNLS LMNYMNISEL EELIGYTFKR KGLLLQAFVH PSFNKHSGGC YQRMEFLGDA
VLEYLMTSYL YSAYPDLKPG QLTDLKSLAV NNNSFAYVAV KKSIHRYLIK DSNYLTTAVN
KFANYVNLSS SEKDLLEEPT CPKVLGDIVE SCVGAVLLDS GFNLNHVWKL MLMLLKPILS
FCGMHIDPMR ELRETCQYNG FDLGLPEPTK YNGEFHVKVE VNINGKMISC TAANRNSKDA
RKVAAQETLS KLKNYGYKHK RKSLEEILRS TTKKESELIG YDEEPINVED DIDMQMNNLL
INGERTSIQS TAGDNKVDKN DANSGRNNKS NVVMQNGCLP RGATDKINQK EYHGDMVRKT
ARSFLYELCA ANYWKPPEFE LCNDEGPSHL RKFTCKVLIE ITGTSVSLLE CYSDPKLQKR
AAQEHAAEGA LWYLKHLGYL PRDENRF
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