ID A0A1D6JA17_MAIZE Unreviewed; 1094 AA.
AC A0A1D6JA17;
DT 30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2016, sequence version 1.
DT 10-MAY-2017, entry version 6.
DE SubName: Full=Dicer-like 103 {ECO:0000313|EMBL:AQK44801.1};
GN ORFNames=ZEAMMB73_Zm00001d025830 {ECO:0000313|EMBL:AQK44801.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae;
OC PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae;
OC Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EnsemblPlants:Zm00001d025830_T012, ECO:0000313|Proteomes:UP000007305};
RN [1] {ECO:0000313|Proteomes:UP000007305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B73 {ECO:0000313|Proteomes:UP000007305};
RX PubMed=19965430; DOI=10.1126/science.1178534;
RA Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S.,
RA Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D.,
RA Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K.,
RA Fronick C., Courtney B., Rock S.M., Belter E., Du F., Kim K.,
RA Abbott R.M., Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M.,
RA Gillam B., Chen W., Yan L., Higginbotham J., Cardenas M.,
RA Waligorski J., Applebaum E., Phelps L., Falcone J., Kanchi K.,
RA Thane T., Scimone A., Thane N., Henke J., Wang T., Ruppert J.,
RA Shah N., Rotter K., Hodges J., Ingenthron E., Cordes M., Kohlberg S.,
RA Sgro J., Delgado B., Mead K., Chinwalla A., Leonard S., Crouse K.,
RA Collura K., Kudrna D., Currie J., He R., Angelova A., Rajasekar S.,
RA Mueller T., Lomeli R., Scara G., Ko A., Delaney K., Wissotski M.,
RA Lopez G., Campos D., Braidotti M., Ashley E., Golser W., Kim H.,
RA Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A., Fan C.,
RA Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T.,
RA Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L.,
RA Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P.,
RA Vaughn M.W., Ying K., Yeh C.-T., Emrich S.J., Jia Y., Kalyanaraman A.,
RA Hsia A.-P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C.,
RA Chaparro C., Chia J.-M., Deragon J.-M., Estill J.C., Fu Y.,
RA Jeddeloh J.A., Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z.,
RA Nagel D.H., McCann M.C., SanMiguel P., Myers A.M., Nettleton D.,
RA Nguyen J., Penning B.W., Ponnala L., Schneider K.L., Schwartz D.C.,
RA Sharma A., Soderlund C., Springer N.M., Sun Q., Wang H., Waterman M.,
RA Westerman R., Wolfgruber T.K., Yang L., Yu Y., Zhang L., Zhou S.,
RA Zhu Q., Bennetzen J.L., Dawe R.K., Jiang J., Jiang N., Presting G.G.,
RA Wessler S.R., Aluru S., Martienssen R.A., Clifton S.W., McCombie W.R.,
RA Wing R.A., Wilson R.K.;
RT "The B73 maize genome: complexity, diversity, and dynamics.";
RL Science 326:1112-1115(2009).
RN [2] {ECO:0000313|EMBL:AQK44801.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Seedling {ECO:0000313|EMBL:AQK44801.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:Zm00001d025830_T012}
RP IDENTIFICATION.
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001d025830_T012};
RG EnsemblPlants;
RL Submitted (OCT-2016) to UniProtKB.
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DR EMBL; CM000786; AQK44801.1; -; Genomic_DNA.
DR EnsemblPlants; Zm00001d025830_T012; Zm00001d025830_T012; Zm00001d025830.
DR Gramene; Zm00001d025830_T012; Zm00001d025830_T012; Zm00001d025830.
DR Proteomes; UP000007305; Chromosome 10.
DR GO; GO:0004525; F:ribonuclease III activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR CDD; cd00593; RIBOc; 2.
DR Gene3D; 1.10.1520.10; -; 2.
DR InterPro; IPR005034; Dicer_dimerisation_dom.
DR InterPro; IPR014720; dsRBD_dom.
DR InterPro; IPR003100; PAZ_dom.
DR InterPro; IPR000999; RNase_III_dom.
DR Pfam; PF03368; Dicer_dimer; 1.
DR Pfam; PF02170; PAZ; 1.
DR Pfam; PF00636; Ribonuclease_3; 2.
DR SMART; SM00358; DSRM; 2.
DR SMART; SM00949; PAZ; 1.
DR SMART; SM00535; RIBOc; 2.
DR SUPFAM; SSF69065; SSF69065; 3.
DR PROSITE; PS51327; DICER_DSRBF; 1.
DR PROSITE; PS50137; DS_RBD; 2.
DR PROSITE; PS50821; PAZ; 1.
DR PROSITE; PS00517; RNASE_3_1; 1.
DR PROSITE; PS50142; RNASE_3_2; 2.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000007305};
KW Reference proteome {ECO:0000313|Proteomes:UP000007305};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00657}.
FT DOMAIN 36 126 Dicer dsRNA-binding fold.
FT {ECO:0000259|PROSITE:PS51327}.
FT DOMAIN 364 428 PAZ. {ECO:0000259|PROSITE:PS50821}.
FT DOMAIN 445 623 RNase III. {ECO:0000259|PROSITE:PS50142}.
FT DOMAIN 664 808 RNase III. {ECO:0000259|PROSITE:PS50142}.
FT DOMAIN 834 901 DRBM (double-stranded RNA-binding).
FT {ECO:0000259|PROSITE:PS50137}.
FT DOMAIN 1007 1083 DRBM (double-stranded RNA-binding).
FT {ECO:0000259|PROSITE:PS50137}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 699 707 ipat:RNASE_3_1 [T]
FT MYHIT 1008 1082 ismart:DSRM [T]
FT MYHIT 835 900 ismart:DSRM [T]
FT MYHIT 664 808 iprf:RNASE_3_2 [T]
FT MYHIT 679 831 ismart:RIBOc [T]
FT MYHIT 1007 1083 iprf:DS_RBD [T]
FT MYHIT 445 623 iprf:RNASE_3_2 [T]
FT MYHIT 327 450 ipfam:PAZ [T]
FT MYHIT 834 901 iprf:DS_RBD [T]
FT MYHIT 36 119 ipfam:Dicer_dimer [T]
FT MYHIT 364 428 iprf:PAZ [T]
FT MYHIT 36 126 iprf:DICER_DSRBF [T]
FT MYHIT 699 808 ipfam:Ribonuclease_3 [T]
FT MYHIT 303 454 ismart:PAZ [T]
FT MYHIT 475 643 ismart:RIBOc [T]
FT MYHIT 493 623 ipfam:Ribonuclease_3 [T]
SQ SEQUENCE 1094 AA; 124716 MW; 0D1F0663BA631A91 CRC64;
MDKEINLRTS NDMFNCLEEN IYRVNDTGAS ISTACSVSLL HRYCDNLPRD IFFVPSPSFF
FVDDVDGIVC KLILPPNAAF RQVNGQPCPS KDEAKRDACL KACIKLHELG ALTDFLLPGQ
GSRKIKVSTT NNSESNKDDD ESFREELYEM LIPAVLRPSR CKLDSSFKLH FYYIEFIPIP
ADRRYQMFGL FVINRLPEES EKLDVELHLA RARIVKAGIK YLGKIEFNKE EMILAHNFQE
MFLKVLLDRS EFTPSYILLG NDGALDMDST FYLLLPIKQK FYGDNMIDWP AVKRCLSSPA
FQDPMGLSLH DSYLPNESLK LLGGTYNKAD VIGSLVYTPH TDLFFFVDAI LDGTNAKSEL
NGATYAEHFK QRLHIKLSHP EQPLLKAKQL FCLRNLLHNR QLESTESEAR ELMEHFVELP
PELCSLKIIG FSKDMGSSLS LLPSLMYRLE NLLVAIELKD VMSSYFPEAS QISASGILES
LTTERCLERI SLERLEVLGD AFLKYVVGRH NFISYEGLDE GQLTRRRSDI VSNSNLYELS
IRRNLQVYIR DQHFEPTQFF ALGRPCKVVC NPDREATLHP KNIDPDRREN CNLRCTKSHH
WLHRKTIADV VESLLGVFIV ECGFKAAFAF LHWIGIKVDF ENSAFYRVLD ASSTNLSLMN
YMNISELEEL IGYTFKRKGL LLQAFVHPSF NKHSGGCYQR MEFLGDAVLE YLMTSYLYSA
YPDLKPGQLT DLKSLAVNNN SFAYVAVKKS IHRYLIKDSN YLTTAVNKFA NYVNLSSSEK
DLLEEPTCPK VLGDIVESCV GAVLLDSGFN LNHVWKLMLM LLKPILSFCG MHIDPMRELR
ETCQYNGFDL GLPEPTKYNG EFHVKVEVNI NGKMISCTAA NRNSKDARKV AAQETLSKLK
NYGYKHKRKS LEEILRSTTK KESELIGYDE EPINVEDDID MQMNNLLING ERTSIQSTAG
DNKVDKNDAN SGRNNKSNVV MQNGCLPRGA TDKINQKEYH GDMVRKTARS FLYELCAANY
WKPPEFELCN DEGPSHLRKF TCKVLIEITG TSVSLLECYS DPKLQKRAAQ EHAAEGALWY
LKHLGYLPRD ENRF
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