ID A0A1D6JA15_MAIZE Unreviewed; 730 AA.
AC A0A1D6JA15;
DT 30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2016, sequence version 1.
DT 10-MAY-2017, entry version 6.
DE SubName: Full=Dicer-like 103 {ECO:0000313|EMBL:AQK44748.1};
GN ORFNames=ZEAMMB73_Zm00001d025830 {ECO:0000313|EMBL:AQK44748.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae;
OC PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae;
OC Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EnsemblPlants:Zm00001d025830_T010, ECO:0000313|Proteomes:UP000007305};
RN [1] {ECO:0000313|Proteomes:UP000007305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B73 {ECO:0000313|Proteomes:UP000007305};
RX PubMed=19965430; DOI=10.1126/science.1178534;
RA Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S.,
RA Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D.,
RA Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K.,
RA Fronick C., Courtney B., Rock S.M., Belter E., Du F., Kim K.,
RA Abbott R.M., Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M.,
RA Gillam B., Chen W., Yan L., Higginbotham J., Cardenas M.,
RA Waligorski J., Applebaum E., Phelps L., Falcone J., Kanchi K.,
RA Thane T., Scimone A., Thane N., Henke J., Wang T., Ruppert J.,
RA Shah N., Rotter K., Hodges J., Ingenthron E., Cordes M., Kohlberg S.,
RA Sgro J., Delgado B., Mead K., Chinwalla A., Leonard S., Crouse K.,
RA Collura K., Kudrna D., Currie J., He R., Angelova A., Rajasekar S.,
RA Mueller T., Lomeli R., Scara G., Ko A., Delaney K., Wissotski M.,
RA Lopez G., Campos D., Braidotti M., Ashley E., Golser W., Kim H.,
RA Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A., Fan C.,
RA Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T.,
RA Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L.,
RA Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P.,
RA Vaughn M.W., Ying K., Yeh C.-T., Emrich S.J., Jia Y., Kalyanaraman A.,
RA Hsia A.-P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C.,
RA Chaparro C., Chia J.-M., Deragon J.-M., Estill J.C., Fu Y.,
RA Jeddeloh J.A., Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z.,
RA Nagel D.H., McCann M.C., SanMiguel P., Myers A.M., Nettleton D.,
RA Nguyen J., Penning B.W., Ponnala L., Schneider K.L., Schwartz D.C.,
RA Sharma A., Soderlund C., Springer N.M., Sun Q., Wang H., Waterman M.,
RA Westerman R., Wolfgruber T.K., Yang L., Yu Y., Zhang L., Zhou S.,
RA Zhu Q., Bennetzen J.L., Dawe R.K., Jiang J., Jiang N., Presting G.G.,
RA Wessler S.R., Aluru S., Martienssen R.A., Clifton S.W., McCombie W.R.,
RA Wing R.A., Wilson R.K.;
RT "The B73 maize genome: complexity, diversity, and dynamics.";
RL Science 326:1112-1115(2009).
RN [2] {ECO:0000313|EMBL:AQK44748.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Seedling {ECO:0000313|EMBL:AQK44748.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:Zm00001d025830_T010}
RP IDENTIFICATION.
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001d025830_T010};
RG EnsemblPlants;
RL Submitted (OCT-2016) to UniProtKB.
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DR EMBL; CM000786; AQK44748.1; -; Genomic_DNA.
DR EMBL; CM000786; AQK44783.1; -; Genomic_DNA.
DR EnsemblPlants; Zm00001d025830_T010; Zm00001d025830_T010; Zm00001d025830.
DR EnsemblPlants; Zm00001d025830_T017; Zm00001d025830_T017; Zm00001d025830.
DR Gramene; Zm00001d025830_T010; Zm00001d025830_T010; Zm00001d025830.
DR Gramene; Zm00001d025830_T017; Zm00001d025830_T017; Zm00001d025830.
DR Proteomes; UP000007305; Chromosome 10.
DR GO; GO:0004525; F:ribonuclease III activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR CDD; cd00593; RIBOc; 1.
DR Gene3D; 1.10.1520.10; -; 2.
DR InterPro; IPR005034; Dicer_dimerisation_dom.
DR InterPro; IPR003100; PAZ_dom.
DR InterPro; IPR000999; RNase_III_dom.
DR Pfam; PF03368; Dicer_dimer; 1.
DR Pfam; PF02170; PAZ; 1.
DR Pfam; PF00636; Ribonuclease_3; 1.
DR SMART; SM00949; PAZ; 1.
DR SMART; SM00535; RIBOc; 1.
DR SUPFAM; SSF101690; SSF101690; 1.
DR SUPFAM; SSF69065; SSF69065; 3.
DR PROSITE; PS51327; DICER_DSRBF; 1.
DR PROSITE; PS50821; PAZ; 1.
DR PROSITE; PS50142; RNASE_3_2; 1.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000007305};
KW Reference proteome {ECO:0000313|Proteomes:UP000007305};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00657}.
FT DOMAIN 66 156 Dicer dsRNA-binding fold.
FT {ECO:0000259|PROSITE:PS51327}.
FT DOMAIN 394 458 PAZ. {ECO:0000259|PROSITE:PS50821}.
FT DOMAIN 475 653 RNase III. {ECO:0000259|PROSITE:PS50142}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 394 458 iprf:PAZ [T]
FT MYHIT 475 653 iprf:RNASE_3_2 [T]
FT MYHIT 66 156 iprf:DICER_DSRBF [T]
FT MYHIT 66 149 ipfam:Dicer_dimer [T]
FT MYHIT 333 484 ismart:PAZ [T]
FT MYHIT 505 673 ismart:RIBOc [T]
FT MYHIT 523 653 ipfam:Ribonuclease_3 [T]
FT MYHIT 357 480 ipfam:PAZ [T]
SQ SEQUENCE 730 AA; 83557 MW; 12A9AB69A0728BF3 CRC64;
MSKSKYVFLL ERGNHSQEKL LDDYITGEII MDKEINLRTS NDMFNCLEEN IYRVNDTGAS
ISTACSVSLL HRYCDNLPRD IFFVPSPSFF FVDDVDGIVC KLILPPNAAF RQVNGQPCPS
KDEAKRDACL KACIKLHELG ALTDFLLPGQ GSRKIKVSTT NNSESNKDDD ESFREELYEM
LIPAVLRPSR CKLDSSFKLH FYYIEFIPIP ADRRYQMFGL FVINRLPEES EKLDVELHLA
RARIVKAGIK YLGKIEFNKE EMILAHNFQE MFLKVLLDRS EFTPSYILLG NDGALDMDST
FYLLLPIKQK FYGDNMIDWP AVKRCLSSPA FQDPMGLSLH DSYLPNESLK LLGGTYNKAD
VIGSLVYTPH TDLFFFVDAI LDGTNAKSEL NGATYAEHFK QRLHIKLSHP EQPLLKAKQL
FCLRNLLHNR QLESTESEAR ELMEHFVELP PELCSLKIIG FSKDMGSSLS LLPSLMYRLE
NLLVAIELKD VMSSYFPEAS QISASGILES LTTERCLERI SLERLEVLGD AFLKYVVGRH
NFISYEGLDE GQLTRRRSDI VSNSNLYELS IRRNLQVYIR DQHFEPTQFF ALGRPCKVVC
NPDREATLHP KNIDPDRREN CNLRCTKSHH WLHRKTIADV VESLLGVFIV ECGFKAAFAF
LHWIGIKVDF ENSAFYRVLD ASSTNLSLMN YMNISELEEL IGYTFKRKGL LLQAFVHPSF
NKHSGGCYQV
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