MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
Description | SubName: Full=Embryo defective 2016 {ECO:0000313|EMBL:AQK64481.1}; |
MyHits synonyms | A0A1D6GMG8_MAIZE , A0A1D6GMG8 , 22312F261E4B8BEB |
Legends: 1, VIR_N. {ECO:0000259|Pfam:PF15912}; 2, ipfam:VIR_N [T].
| |
ID A0A1D6GMG8_MAIZE Unreviewed; 2212 AA. AC A0A1D6GMG8; DT 30-NOV-2016, integrated into UniProtKB/TrEMBL. DT 30-NOV-2016, sequence version 1. DT 12-APR-2017, entry version 5. DE SubName: Full=Embryo defective 2016 {ECO:0000313|EMBL:AQK64481.1}; GN ORFNames=ZEAMMB73_Zm00001d013829 {ECO:0000313|EMBL:AQK64481.1}; OS Zea mays (Maize). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; OC PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; OC Zea. OX NCBI_TaxID=4577 {ECO:0000313|EnsemblPlants:Zm00001d013829_T002, ECO:0000313|Proteomes:UP000007305}; RN [1] {ECO:0000313|Proteomes:UP000007305} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. B73 {ECO:0000313|Proteomes:UP000007305}; RX PubMed=19965430; DOI=10.1126/science.1178534; RA Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S., RA Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D., RA Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K., RA Fronick C., Courtney B., Rock S.M., Belter E., Du F., Kim K., RA Abbott R.M., Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M., RA Gillam B., Chen W., Yan L., Higginbotham J., Cardenas M., RA Waligorski J., Applebaum E., Phelps L., Falcone J., Kanchi K., RA Thane T., Scimone A., Thane N., Henke J., Wang T., Ruppert J., RA Shah N., Rotter K., Hodges J., Ingenthron E., Cordes M., Kohlberg S., RA Sgro J., Delgado B., Mead K., Chinwalla A., Leonard S., Crouse K., RA Collura K., Kudrna D., Currie J., He R., Angelova A., Rajasekar S., RA Mueller T., Lomeli R., Scara G., Ko A., Delaney K., Wissotski M., RA Lopez G., Campos D., Braidotti M., Ashley E., Golser W., Kim H., RA Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A., Fan C., RA Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T., RA Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L., RA Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P., RA Vaughn M.W., Ying K., Yeh C.-T., Emrich S.J., Jia Y., Kalyanaraman A., RA Hsia A.-P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C., RA Chaparro C., Chia J.-M., Deragon J.-M., Estill J.C., Fu Y., RA Jeddeloh J.A., Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z., RA Nagel D.H., McCann M.C., SanMiguel P., Myers A.M., Nettleton D., RA Nguyen J., Penning B.W., Ponnala L., Schneider K.L., Schwartz D.C., RA Sharma A., Soderlund C., Springer N.M., Sun Q., Wang H., Waterman M., RA Westerman R., Wolfgruber T.K., Yang L., Yu Y., Zhang L., Zhou S., RA Zhu Q., Bennetzen J.L., Dawe R.K., Jiang J., Jiang N., Presting G.G., RA Wessler S.R., Aluru S., Martienssen R.A., Clifton S.W., McCombie W.R., RA Wing R.A., Wilson R.K.; RT "The B73 maize genome: complexity, diversity, and dynamics."; RL Science 326:1112-1115(2009). RN [2] {ECO:0000313|EMBL:AQK64481.1} RP NUCLEOTIDE SEQUENCE. RC TISSUE=Seedling {ECO:0000313|EMBL:AQK64481.1}; RG Maize Genome Sequencing Project; RA Ware D.; RT "Update maize B73 reference genome by single molecule sequencing RT technologies."; RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases. RN [3] {ECO:0000313|EnsemblPlants:Zm00001d013829_T002} RP IDENTIFICATION. RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001d013829_T002}; RG EnsemblPlants; RL Submitted (OCT-2016) to UniProtKB. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM000781; AQK64481.1; -; Genomic_DNA. DR EnsemblPlants; Zm00001d013829_T002; Zm00001d013829_T002; Zm00001d013829. DR Gramene; Zm00001d013829_T002; Zm00001d013829_T002; Zm00001d013829. DR Proteomes; UP000007305; Chromosome 5. DR Gene3D; 1.25.10.10; -; 2. DR InterPro; IPR011989; ARM-like. DR InterPro; IPR031801; VIR_N. DR InterPro; IPR026736; Virilizer. DR PANTHER; PTHR23185; PTHR23185; 1. DR Pfam; PF15912; VIR_N; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000007305}; KW Reference proteome {ECO:0000313|Proteomes:UP000007305}. FT DOMAIN 8 122 VIR_N. {ECO:0000259|Pfam:PF15912}. CC -------------------------------------------------------------------------- CC The following FT lines are automated annotations from the MyHits database. CC -------------------------------------------------------------------------- FT MYHIT 8 122 ipfam:VIR_N [T] SQ SEQUENCE 2212 AA; 244120 MW; 22312F261E4B8BEB CRC64; MGRPEPVVLF AQTILHSQLD EYVDEVLFSE PVVITACEFL EQNASPSTPN ISLVGATSPP SFALEMFVHC DGESRFRRLC HPFLYSHSSS NVLEVEAIVT NHLVLRGTYR SLTLVIYGNT AEDLGQFNIE LGLDHSLANV VSSPSEGKLE DLPPALHSSK LSFEESLSSL KPSSFHATDV DLSIEAKKVL HLALKMYQIS DVENLIPNLR SAVLSAISKY VTASTNHILH TLSQDSANAF INSDFDSQEI NKILAEAGKE LSEIWKNVHA VTESNLFNDN GFTIGVDEDL PTTKILIELF NHCFPYYKKL SLLDLQCPSQ SKWLVLSLSL VLLLCSSKES CFYFVDTGGM EQIINLLCWR TPKSAATTLL LLGIVEHATR NGFGCEAFLG WWPRAEHTSI PVGSSDGYCS LLKLLLEKER HDIASLATYV LQRLRFYEIL SKYESAVVKV ISNIQADKLS TDGVPFLISA SVELGEMLKL IIFCGPIEDP SPVATASRIF KSEHLEGLLS YKATIDLITS SKYSFLQYDT DPYLLSLIQE RSFFPLSAAL LSSPILHLPN GPAAEILMGI ASSIESIILS LLFCRSGLSF LLSQPEATEL ILLSLQDAEK MNKSECITLR QAFVLLSKGF FCRPKEVGLI TELHLKVGSA ATRILSVPPN SDELLWVLWE LCAISRSDSG RQALLALGYF PECCIRVLTC LCVCLISGGS PLGLAIFHSA AEILEVLVVD STASSLESWI GFAVDLHKAL HSSSPGSNRK DAPTRLLEWI DAGVVYQRNG ARGLLRYSAI LASGGDAHLS SGNVLVSDSM DVENVVADSN SRDGQVIDNL LGKLVADKYF DGVALCSTSV VQLTTAFRIL AFISDDKPVA SSLFEEGAIT VIYVVLMNCK SMLERLSNSY DYLVDEGAEL SSTTELLLDR THEKAIVDLM IPSLVLLINL LHILRETKEQ YRNKKLLSSL LQLHREVSPR LAACAADLSF MFPTFAIGFG VVCHLITSAL ACWPLYNWAP GLFHCLLENT EATNASVPLG PKAAFSLLCL LGDLFPDEGI WLWKVELPSL SAIRSLSTGA VLGPQVEKGV NWYLHPEHVT ILLVRLMPQL DRLARIIDNF ATSVLMVIQD MLRVFIVRVA LEKIECAVVL LRPIFMWLDD KVDKTSLSER DTFKVHQLLQ FTVKLSEHPT GKALLWRMGF TRILSKLLQN CSRASFPYDN QTFGRAHSKN DLMLKWRIPL FKSIAYIFSI DPCNNEKADV EESLNEKSVH ECSSVMHDLM MFCQVLPVGR EMLACSLAFK ELVYSYTCRS AVTLILSQIH TSNKDVLEKD ESDPNHNSPS LDGWNCFSSL FKCWKKLVKY VGSNERTDYL VETIYSLTLG AITLSQYGEN LEGLLILRYL FGLPSDPSGS LESSGESPSE IELFMKTYEE KICQGIENSA TAVGKTLLRK LLNSIKLLRS ILENSGQSAD TVQMVLEEGT DSLSEIARSV VMTAHLMPSL ANVSVNDESP FLFSNMWKVI VDSEEPLDCQ EGEFAKRLVW ELPDSSLDRQ LAPGQSARRK LALGESASRR VRDNQLPEPT GQFSRGLNTS NASSGHTRRD TFRQRKPNTS RPPSMHVDDY VARERNIDGA SSASNIVNST PRGTLSGRPP SIHVDEFMAR QRERQNHAPA PTGDAPQAKS QTTSLDDSLR TKPENLRQPK TDLDDDQEIE IVFDEESGSD DKLPFPQPDD SLQSPPVIIG ENSPGPVIDE TENQENERVP FFQRATSIPK DDENLGIGIS SQTAMLSEAN SSLELKHSVS SPGKNSFRDH AEESNYDSIG VSGRPSLQAD HQQLSRRHEK RSPRKFSETS LSNGFHGREH RHSNNHPPLP PMPPPISSVS MQNTDSVNRQ SSSFSARDRP TPNPSGYPTQ SFDSSMPSAF TGLQGQTQYM LAGAGSSSAN ELPNVEAKLL WNTFPANRIP LETFSSGLPA RPMPPLTPYS AVATQHATMN SGSPANLYSQ GSVVQPSPTA SIISDSNLAM NSASGSMLAS NLLPSFASQF LMSRPSMPTP FFGTPLQQVQ FSSGLPQNIS NPQPPVSIQP RPPPPPPPPQ QPHPSQTLQQ LGAIQLPHQD QQHSYPHSAI LPQVTLQFPN QLPIPQVQLY HQSQQESGQT LRQVGEQSQL QNQGMQADSF SQQQQDSGIN LNQFFSSPEA IQSLLSDREK LCQLLEQNPK LMQMLQDRIG QL // |