MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | SubName: Full=Cold-regulated 413 inner membrane protein 2 chloroplastic {ECO:0000313|EMBL:ONM25521.1}; |
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| MyHits synonyms | A0A1D6F258_MAIZE , A0A1D6F258 , 7E1EDF237C8F1897 |
 Legends: 1, TRANSMEM Helical. {ECO:0000256|SAM:Phobius}.
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ID A0A1D6F258_MAIZE Unreviewed; 231 AA.
AC A0A1D6F258;
DT 30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2016, sequence version 1.
DT 12-APR-2017, entry version 5.
DE SubName: Full=Cold-regulated 413 inner membrane protein 2 chloroplastic {ECO:0000313|EMBL:ONM25521.1};
GN ORFNames=ZEAMMB73_Zm00001d006934 {ECO:0000313|EMBL:ONM25521.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae;
OC PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae;
OC Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EnsemblPlants:Zm00001d006934_T002, ECO:0000313|Proteomes:UP000007305};
RN [1] {ECO:0000313|EMBL:ONM25521.1, ECO:0000313|Proteomes:UP000007305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B73 {ECO:0000313|Proteomes:UP000007305};
RC TISSUE=Seedling {ECO:0000313|EMBL:ONM25521.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:Zm00001d006934_T002}
RP IDENTIFICATION.
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001d006934_T002};
RG EnsemblPlants;
RL Submitted (OCT-2016) to UniProtKB.
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DR EMBL; CM007648; ONM25521.1; -; Genomic_DNA.
DR EnsemblPlants; Zm00001d006934_T002; Zm00001d006934_T002; Zm00001d006934.
DR Gramene; Zm00001d006934_T002; Zm00001d006934_T002; Zm00001d006934.
DR Proteomes; UP000007305; Chromosome 2.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR InterPro; IPR008892; COR413.
DR Pfam; PF05562; WCOR413; 1.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000007305};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000007305};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 114 132 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 144 169 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 181 199 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 211 230 Helical. {ECO:0000256|SAM:Phobius}.
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CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 76 222 ipfam:WCOR413 [T]
SQ SEQUENCE 231 AA; 24537 MW; 7E1EDF237C8F1897 CRC64;
MSISMRLAIP APAVTDAAPT RLRVRVAATG NDGSLPVARA AVQAETGALR RAFLQGMRLA
AIEAAGSGPA VPEQGGAVVC HSSAHLSVRT IQWISARTIA VLLVAKGTAI HKSFLVPFFA
LQTPCCIISW IKGDYGQWTA FLSLLVRLFF FIPGELELPL STMLLVSVAP YQFMDLRGTQ
GGVVMSLVIA AYLAFQHFTR VGGPGKAFEQ GSIVATLAII CIMIVPLMLL F
//
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