MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:OCA19782.1}; |
 |
|
| MyHits synonyms | A0A1B8Y9X4_XENTR , A0A1B8Y9X4 , 84A0E8FAD216B60D |
 Legends: 1, U1-type. {ECO:0000259|SMART:SM00451}; 2, ismart:ZnF_U1 [T]; 3, ipfam:zf-C2H2_jaz [T].
| |
ID A0A1B8Y9X4_XENTR Unreviewed; 357 AA.
AC A0A1B8Y9X4;
DT 02-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 02-NOV-2016, sequence version 1.
DT 10-MAY-2017, entry version 7.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:OCA19782.1};
GN Name=znf830 {ECO:0000313|Xenbase:XB-GENE-5806791};
GN ORFNames=XENTR_v90027852mg {ECO:0000313|EMBL:OCA19782.1};
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus;
OC Silurana.
OX NCBI_TaxID=8364 {ECO:0000313|EMBL:OCA19782.1, ECO:0000313|Proteomes:UP000008143};
RN [1] {ECO:0000313|EMBL:OCA19782.1, ECO:0000313|Proteomes:UP000008143}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Nigerian {ECO:0000313|EMBL:OCA19782.1,
RC ECO:0000313|Proteomes:UP000008143};
RX PubMed=20431018; DOI=10.1126/science.1183670;
RA Hellsten U., Harland R.M., Gilchrist M.J., Hendrix D., Jurka J.,
RA Kapitonov V., Ovcharenko I., Putnam N.H., Shu S., Taher L.,
RA Blitz I.L., Blumberg B., Dichmann D.S., Dubchak I., Amaya E.,
RA Detter J.C., Fletcher R., Gerhard D.S., Goodstein D., Graves T.,
RA Grigoriev I.V., Grimwood J., Kawashima T., Lindquist E., Lucas S.M.,
RA Mead P.E., Mitros T., Ogino H., Ohta Y., Poliakov A.V., Pollet N.,
RA Robert J., Salamov A., Sater A.K., Schmutz J., Terry A., Vize P.D.,
RA Warren W.C., Wells D., Wills A., Wilson R.K., Zimmerman L.B.,
RA Zorn A.M., Grainger R., Grammer T., Khokha M.K., Richardson P.M.,
RA Rokhsar D.S.;
RT "The genome of the Western clawed frog Xenopus tropicalis.";
RL Science 328:633-636(2010).
CC -----------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution-NoDerivs License
CC -----------------------------------------------------------------------
DR EMBL; KV460368; OCA19782.1; -; Genomic_DNA.
DR RefSeq; NP_001004918.1; NM_001004918.2.
DR UniGene; Str.42988; -.
DR GeneID; 448299; -.
DR KEGG; xtr:448299; -.
DR CTD; 91603; -.
DR Xenbase; XB-GENE-5806791; znf830.
DR KO; K13104; -.
DR Proteomes; UP000008143; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR InterPro; IPR003604; Matrin/U1-like-C_Znf_C2H2.
DR InterPro; IPR022755; Znf_C2H2_jaz.
DR InterPro; IPR013087; Znf_C2H2_type.
DR Pfam; PF12171; zf-C2H2_jaz; 1.
DR SMART; SM00451; ZnF_U1; 1.
DR SUPFAM; SSF57667; SSF57667; 1.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000008143};
KW Metal-binding {ECO:0000256|SAAS:SAAS00771733};
KW Reference proteome {ECO:0000313|Proteomes:UP000008143};
KW Zinc {ECO:0000256|SAAS:SAAS00771733};
KW Zinc-finger {ECO:0000256|SAAS:SAAS00771733}.
FT DOMAIN 42 76 U1-type. {ECO:0000259|SMART:SM00451}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 42 76 ismart:ZnF_U1 [T]
FT MYHIT 47 70 ipfam:zf-C2H2_jaz [T]
SQ SEQUENCE 357 AA; 40577 MW; 84A0E8FAD216B60D CRC64;
MADAGKKKLV QQEELRRLMK AKQRRSCSKK RIESPLAKYN SLGHLLCVVC NIQIKSELLW
PAHILGKQHK EKVAELKGSK ANISSPSNKV QLHHIMKRKG SEPENQESKR IKGTEDQPTA
LKTKLPEGFF ETEETSSAKH AAEKAPSLKL LAGDYEDDDE VEGEEYENVN EASTSLQKPA
EIPLPPPTSS ADRLPADFFE SKMPLVSHSG SVLKADIQEK IVERKDNTAE ALPEGFFDDP
EADAKVRKVD APKDQMDKEW EEFQKEIRQV NSVSDAIVAE EDEEGRLDRQ IDEIDEQIEC
YRRVEHLRDL KDTLQDAKME VLKSKSSKKW QEEIGSDDEE TLPSLLYKNW RDKGAFL
//
| |