MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | SubName: Full=Long intergenic non-protein coding RNA 1125 {ECO:0000313|Ensembl:ENSP00000490587}; |
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| MyHits synonyms | A0A1B0GVN3_HUMAN , A0A1B0GVN3 , 9505459B92BE4E7A |
 Legends: 1, SIGNAL {ECO:0000256|SAM:SignalP}; 2, TRANSMEM Helical. {ECO:0000256|SAM:Phobius}.
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ID A0A1B0GVN3_HUMAN Unreviewed; 265 AA.
AC A0A1B0GVN3;
DT 05-OCT-2016, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2016, sequence version 1.
DT 15-MAR-2017, entry version 4.
DE SubName: Full=Long intergenic non-protein coding RNA 1125 {ECO:0000313|Ensembl:ENSP00000490587};
GN Name=LINC01125 {ECO:0000313|Ensembl:ENSP00000490587};
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
OC Catarrhini; Hominidae; Homo.
OX NCBI_TaxID=9606 {ECO:0000313|Ensembl:ENSP00000490587, ECO:0000313|Proteomes:UP000005640};
RN [1] {ECO:0000313|Ensembl:ENSP00000490587, ECO:0000313|Proteomes:UP000005640}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=15815621; DOI=10.1038/nature03466;
RA Hillier L.W., Graves T.A., Fulton R.S., Fulton L.A., Pepin K.H.,
RA Minx P., Wagner-McPherson C., Layman D., Wylie K., Sekhon M.,
RA Becker M.C., Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E.,
RA Kremitzki C., Oddy L., Du H., Sun H., Bradshaw-Cordum H., Ali J.,
RA Carter J., Cordes M., Harris A., Isak A., van Brunt A., Nguyen C.,
RA Du F., Courtney L., Kalicki J., Ozersky P., Abbott S., Armstrong J.,
RA Belter E.A., Caruso L., Cedroni M., Cotton M., Davidson T., Desai A.,
RA Elliott G., Erb T., Fronick C., Gaige T., Haakenson W., Haglund K.,
RA Holmes A., Harkins R., Kim K., Kruchowski S.S., Strong C.M.,
RA Grewal N., Goyea E., Hou S., Levy A., Martinka S., Mead K.,
RA McLellan M.D., Meyer R., Randall-Maher J., Tomlinson C.,
RA Dauphin-Kohlberg S., Kozlowicz-Reilly A., Shah N.,
RA Swearengen-Shahid S., Snider J., Strong J.T., Thompson J., Yoakum M.,
RA Leonard S., Pearman C., Trani L., Radionenko M., Waligorski J.E.,
RA Wang C., Rock S.M., Tin-Wollam A.-M., Maupin R., Latreille P.,
RA Wendl M.C., Yang S.-P., Pohl C., Wallis J.W., Spieth J., Bieri T.A.,
RA Berkowicz N., Nelson J.O., Osborne J., Ding L., Meyer R., Sabo A.,
RA Shotland Y., Sinha P., Wohldmann P.E., Cook L.L., Hickenbotham M.T.,
RA Eldred J., Williams D., Jones T.A., She X., Ciccarelli F.D.,
RA Izaurralde E., Taylor J., Schmutz J., Myers R.M., Cox D.R., Huang X.,
RA McPherson J.D., Mardis E.R., Clifton S.W., Warren W.C.,
RA Chinwalla A.T., Eddy S.R., Marra M.A., Ovcharenko I., Furey T.S.,
RA Miller W., Eichler E.E., Bork P., Suyama M., Torrents D.,
RA Waterston R.H., Wilson R.K.;
RT "Generation and annotation of the DNA sequences of human chromosomes 2
RT and 4.";
RL Nature 434:724-731(2005).
RN [2] {ECO:0000313|Ensembl:ENSP00000490587}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (JUL-2016) to UniProtKB.
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSP00000490587}.
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DR EMBL; AC017099; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR Ensembl; ENST00000627399; ENSP00000490587; ENSG00000228486.
DR HGNC; HGNC:49272; LINC01125.
DR OpenTargets; ENSG00000228486; -.
DR GeneTree; ENSGT00850000133613; -.
DR Proteomes; UP000005640; Chromosome 2.
DR ExpressionAtlas; A0A1B0GVN3; baseline and differential.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000005640};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000005640};
KW Signal {ECO:0000256|SAM:SignalP};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1 20 {ECO:0000256|SAM:SignalP}.
FT CHAIN 21 265 {ECO:0000256|SAM:SignalP}.
FT /FTId=PRO_5008408670.
FT TRANSMEM 192 216 Helical. {ECO:0000256|SAM:Phobius}.
SQ SEQUENCE 265 AA; 30198 MW; 9505459B92BE4E7A CRC64;
MSRAMALFFV LCWIQDEIVL QVFSKVPYDP SFDETRTAVR SITKRDTQKS YSQQKSLNNA
AFASGSNERE EHLAKIFDEI LLQVFPKFPY DPSFNEATAV RSITKTDMRK GTSIAWNSPK
PEYFLGSVDK IPDKDHLSEE KNFKESCLFD RDLREQLTTI DKETLQGAAK PDAHFRTMPC
GQLLHFLQRN TIIAAVSGVA ILMAIVLLLL GLASYIRKKQ PSSPLANTTY NIFIMDGKTW
WHNSEEKNFT KLAKKQKQLK SSSCV
//
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