Entry euk:A0A0R4IB56_DANRE

ID   A0A0R4IB56_DANRE        Unreviewed;       263 AA.
AC   A0A0R4IB56;
DT   20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT   20-JAN-2016, sequence version 1.
DT   15-MAR-2017, entry version 9.
DE   SubName: Full=Zgc:101853 {ECO:0000313|Ensembl:ENSDARP00000131975};
GN   ORFNames=zgc:101853 {ECO:0000313|Ensembl:ENSDARP00000131975,
GN   ECO:0000313|ZFIN:ZDB-GENE-041212-13};
OS   Danio rerio (Zebrafish) (Brachydanio rerio).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
OX   NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000131975, ECO:0000313|Proteomes:UP000000437};
RN   [1] {ECO:0000313|Ensembl:ENSDARP00000131975, ECO:0000313|Proteomes:UP000000437}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000131975,
RC   ECO:0000313|Proteomes:UP000000437};
RX   PubMed=23594743; DOI=10.1038/nature12111;
RA   Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA   Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA   McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA   Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA   Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA   Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA   Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA   Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA   Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA   Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA   Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA   Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA   Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA   Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA   Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA   Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA   Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA   Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA   Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA   Saunders D., Wallis J., Babbage A., Hammond S.,
RA   Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA   Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA   Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA   Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA   Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA   Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA   Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA   Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA   Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA   Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA   Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA   Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA   Stemple D.L.;
RT   "The zebrafish reference genome sequence and its relationship to the
RT   human genome.";
RL   Nature 496:498-503(2013).
RN   [2] {ECO:0000313|Ensembl:ENSDARP00000131975}
RP   IDENTIFICATION.
RC   STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000131975};
RG   Ensembl;
RL   Submitted (NOV-2015) to UniProtKB.
CC   -!- CAUTION: The sequence shown here is derived from an Ensembl
CC       automatic analysis pipeline and should be considered as
CC       preliminary data. {ECO:0000313|Ensembl:ENSDARP00000131975}.
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DR   EMBL; CABZ01076995; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CABZ01076996; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CU905501; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   Ensembl; ENSDART00000165062; ENSDARP00000131975; ENSDARG00000036894.
DR   ZFIN; ZDB-GENE-041212-13; zgc:101853.
DR   GeneTree; ENSGT00790000123080; -.
DR   Proteomes; UP000000437; Chromosome 23.
DR   ExpressionAtlas; A0A0R4IB56; baseline.
DR   GO; GO:0000049; F:tRNA binding; IEA:InterPro.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR002547; tRNA-bd_dom.
DR   Pfam; PF01588; tRNA_bind; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   PROSITE; PS50886; TRBD; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT   DOMAIN      140    241       TRNA-binding.
FT                                {ECO:0000259|PROSITE:PS50886}.
FT   COILED       43     77       {ECO:0000256|SAM:Coils}.
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CC   The following FT lines are automated annotations from the MyHits database.
CC   --------------------------------------------------------------------------
FT   MYHIT       146    238       ipfam:tRNA_bind [T]
FT   MYHIT       140    241       iprf:TRBD [T]
SQ   SEQUENCE   263 AA;  29547 MW;  806F2CAE0099BC1A CRC64;
     MSKDKPPTSR ADPPQQEQMM EYFTQQILFL KEKAMLQASV REEKKLLVEN AKLKKDIDDL
     KNLLQDTQKR KAVKLRQERA LSASIASTSA QLGEPAPSTH TAPSATQTHA HTHHDGRRRR
     ERRGVSCESV CVLSREQKLD VSRLDLRVAR ILDVRKHPDS ESLYVQEVEL GEHAPRTVVS
     GLTNHVPPEQ LLGSLVVLLC NVRSVKVRGV QSQARLLCAV NQERMEPLTP PTGAQPGDRV
     TFQLYPGKIY LCVCVCVCVC MWV
//