ID A0A0G2L8S2_DANRE Unreviewed; 398 AA.
AC A0A0G2L8S2;
DT 22-JUL-2015, integrated into UniProtKB/TrEMBL.
DT 22-JUL-2015, sequence version 1.
DT 10-MAY-2017, entry version 11.
DE SubName: Full=Zinc finger protein 1060 {ECO:0000313|Ensembl:ENSDARP00000141187};
GN Name=znf1060 {ECO:0000313|Ensembl:ENSDARP00000141187,
GN ECO:0000313|ZFIN:ZDB-GENE-141211-13};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000141187, ECO:0000313|Proteomes:UP000000437};
RN [1] {ECO:0000313|Ensembl:ENSDARP00000141187, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000141187,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
RN [2] {ECO:0000313|Ensembl:ENSDARP00000141187}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000141187};
RG Ensembl;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSDARP00000141187}.
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DR EMBL; CR854948; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR Ensembl; ENSDART00000162361; ENSDARP00000139069; ENSDARG00000103441.
DR Ensembl; ENSDART00000164496; ENSDARP00000141187; ENSDARG00000103441.
DR ZFIN; ZDB-GENE-141211-13; znf1060.
DR GeneTree; ENSGT00860000134123; -.
DR Proteomes; UP000000437; Chromosome 4.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 3.30.40.10; -; 2.
DR InterPro; IPR013087; Znf_C2H2_type.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR SMART; SM00355; ZnF_C2H2; 12.
DR SUPFAM; SSF57667; SSF57667; 6.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 10.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 12.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT DOMAIN 59 86 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 87 114 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 115 142 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 143 170 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 171 198 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 199 226 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 227 254 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 255 282 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 283 310 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 311 335 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 339 367 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 368 395 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 61 81 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 87 109 ismart:ZnF_C2H2 [T]
FT MYHIT 199 221 ismart:ZnF_C2H2 [T]
FT MYHIT 283 305 ismart:ZnF_C2H2 [T]
FT MYHIT 227 249 ismart:ZnF_C2H2 [T]
FT MYHIT 115 142 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 143 170 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 255 277 ismart:ZnF_C2H2 [T]
FT MYHIT 368 390 ismart:ZnF_C2H2 [T]
FT MYHIT 229 249 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 173 193 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 227 254 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 143 165 ismart:ZnF_C2H2 [T]
FT MYHIT 117 137 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 255 282 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 115 137 ismart:ZnF_C2H2 [T]
FT MYHIT 201 221 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 145 165 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 199 226 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 283 310 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 257 277 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 339 359 ismart:ZnF_C2H2 [T]
FT MYHIT 368 395 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 171 193 ismart:ZnF_C2H2 [T]
FT MYHIT 59 81 ismart:ZnF_C2H2 [T]
FT MYHIT 59 86 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 87 114 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 370 390 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 89 109 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 171 198 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 285 305 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 339 367 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 311 333 ismart:ZnF_C2H2 [T]
FT MYHIT 311 335 iprf:ZINC_FINGER_C2H2_2 [T]
SQ SEQUENCE 398 AA; 45894 MW; F11002AA3CAC4B54 CRC64;
MEEKLQEITT DEKPTLTKKT SSRGRPRKSK SACNFGSKQS RKSFSQKSNL DVHTREKPYT
CEQCGKSFGH IQGFKNHMRI HTGEKPFSCK QCGKSFTQKA NLDVHMRVHT KERPYTCEQC
GKSFTYKQGF TTHMRIHTGE RPYTCQQCEK SFYHPGNFAV HMRIHTGERA YTCQQCGKSF
YQSGNFAVHM RIHTGERPYS CIQCGKSFKQ NCTLEVHMRT HTGDRSFICT HCGKRFSQKH
DLNIHMRIHT GKKPHTCTQC GKRFTQKTSL DNHMSIHTGE KPYRCTECGK TFPHKSSLKH
HMRTHTGEKP FACTQCGKRF TTKASLKNLM DGHTGTIVLT CDQCEKSLTR KESIRKHIRK
INTGEDPFRC SECGKGFKRK RSLNTHLKLH NGEQSPQN
//
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