MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | SubName: Full=Zinc finger protein 996 {ECO:0000313|Ensembl:ENSDARP00000137451}; |
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| MyHits synonyms | A0A0G2KYB1_DANRE , A0A0G2KYB1 , 2C04DF27EC7031DA |
 Legends: 1, C2H2-type. {ECO:0000259|PROSITE:PS50157}; 2, ipat:ZINC_FINGER_C2H2_1 [T]; 3, iprf:ZINC_FINGER_C2H2_2 [T]; 4, ismart:ZnF_C2H2 [T].
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ID A0A0G2KYB1_DANRE Unreviewed; 311 AA.
AC A0A0G2KYB1;
DT 22-JUL-2015, integrated into UniProtKB/TrEMBL.
DT 22-JUL-2015, sequence version 1.
DT 10-MAY-2017, entry version 14.
DE SubName: Full=Zinc finger protein 996 {ECO:0000313|Ensembl:ENSDARP00000137451};
GN Name=znf996 {ECO:0000313|Ensembl:ENSDARP00000137451,
GN ECO:0000313|ZFIN:ZDB-GENE-110913-147};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000137451, ECO:0000313|Proteomes:UP000000437};
RN [1] {ECO:0000313|Ensembl:ENSDARP00000137451, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000137451,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
RN [2] {ECO:0000313|Ensembl:ENSDARP00000137451}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000137451};
RG Ensembl;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSDARP00000137451}.
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DR EMBL; AL590152; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BX548173; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR Ensembl; ENSDART00000163024; ENSDARP00000137451; ENSDARG00000099444.
DR ZFIN; ZDB-GENE-110913-147; znf996.
DR GeneTree; ENSGT00870000136604; -.
DR OMA; MQAHAGE; -.
DR OrthoDB; EOG091G02KC; -.
DR Proteomes; UP000000437; Chromosome 4.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR InterPro; IPR013087; Znf_C2H2_type.
DR SMART; SM00355; ZnF_C2H2; 9.
DR SUPFAM; SSF57667; SSF57667; 5.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 9.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 9.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT DOMAIN 56 83 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 84 111 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 112 139 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 140 167 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 168 195 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 196 223 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 224 251 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 252 279 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 280 307 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
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CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 58 78 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 140 167 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 282 302 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 224 246 ismart:ZnF_C2H2 [T]
FT MYHIT 280 307 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 140 162 ismart:ZnF_C2H2 [T]
FT MYHIT 84 106 ismart:ZnF_C2H2 [T]
FT MYHIT 224 251 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 56 78 ismart:ZnF_C2H2 [T]
FT MYHIT 226 246 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 196 223 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 56 83 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 114 134 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 142 162 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 254 274 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 252 274 ismart:ZnF_C2H2 [T]
FT MYHIT 112 134 ismart:ZnF_C2H2 [T]
FT MYHIT 252 279 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 170 190 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 112 139 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 84 111 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 86 106 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 198 218 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 196 218 ismart:ZnF_C2H2 [T]
FT MYHIT 168 195 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 168 190 ismart:ZnF_C2H2 [T]
FT MYHIT 280 302 ismart:ZnF_C2H2 [T]
SQ SEQUENCE 311 AA; 35767 MW; 2C04DF27EC7031DA CRC64;
MSDPEPCKIK NEDSEQQIDL IEENEGSKEE EHHVKIEEKN NLQTDGFLKR RDKNHFTCTQ
CGTSFGRKRD LKIHRRIHTG KKPFTCTQCG NSFNSSSHLN QHMRIHTREK PFTCTQCEKS
FSQSSNLNLH MRIHTREKPF TCTQCGKNFN QSSNLNRHMR IHTGEKPFTC TQCGTSFIRS
SSLNLHIMSH NGEKPFTCTQ CGKSFNRSSH LNRHMMIHTG EKPFTCTQCG MSFSQSSNLN
LHMRIHTGEK PFACPQCGMS FSQSSNLNLH MRVHTGEKPF TCPQCGKSFN SSSHLNRHMR
IHTGEKPFTC K
//
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