MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | SubName: Full=Zinc finger protein 532 {ECO:0000313|Ensembl:ENSRNOP00000071139}; |
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| MyHits synonyms | A0A0G2JZQ5_RAT , A0A0G2JZQ5 , AA06C2F25F09B219 |
 Legends: 1, C2H2-type. {ECO:0000259|PROSITE:PS50157}; 2, iprf:ZINC_FINGER_C2H2_2 [T]; 3, ismart:ZnF_C2H2 [T]; 4, ipat:ZINC_FINGER_C2H2_1 [T].
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ID A0A0G2JZQ5_RAT Unreviewed; 1353 AA.
AC A0A0G2JZQ5;
DT 22-JUL-2015, integrated into UniProtKB/TrEMBL.
DT 22-JUL-2015, sequence version 1.
DT 10-MAY-2017, entry version 9.
DE SubName: Full=Zinc finger protein 532 {ECO:0000313|Ensembl:ENSRNOP00000071139};
GN Name=Zfp532 {ECO:0000313|Ensembl:ENSRNOP00000071139,
GN ECO:0000313|RGD:1311719};
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
OC Muroidea; Muridae; Murinae; Rattus.
OX NCBI_TaxID=10116 {ECO:0000313|Ensembl:ENSRNOP00000071139, ECO:0000313|Proteomes:UP000002494};
RN [1] {ECO:0000313|Ensembl:ENSRNOP00000071139, ECO:0000313|Proteomes:UP000002494}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000071139,
RC ECO:0000313|Proteomes:UP000002494};
RX PubMed=15057822; DOI=10.1038/nature02426;
RG Rat Genome Sequencing Project Consortium;
RA Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J.,
RA Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G.,
RA Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G.,
RA Morgan M., Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G.,
RA Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S.,
RA Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T.,
RA Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T.,
RA Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A.,
RA Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M.,
RA Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K.,
RA Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S.,
RA Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J.,
RA Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y.,
RA Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A.,
RA Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J.,
RA D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R.,
RA Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A.,
RA Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E.,
RA Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E.,
RA Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J.,
RA Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D.,
RA Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M.,
RA Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O.,
RA Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O.,
RA Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H.,
RA Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S.,
RA Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J.,
RA Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M.,
RA Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E.,
RA Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F.,
RA Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K.,
RA Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S.,
RA Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M.,
RA Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M.,
RA Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A.,
RA Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S.,
RA Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G.,
RA Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H.,
RA Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R.,
RA Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M.,
RA Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H.,
RA Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S.,
RA Collins F.S.;
RT "Genome sequence of the Brown Norway rat yields insights into
RT mammalian evolution.";
RL Nature 428:493-521(2004).
RN [2] {ECO:0000213|PubMed:22673903}
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX PubMed=22673903;
RA Lundby A., Secher A., Lage K., Nordsborg N.B., Dmytriyev A.,
RA Lundby C., Olsen J.V.;
RT "Quantitative maps of protein phosphorylation sites across 14
RT different rat organs and tissues.";
RL Nat. Commun. 3:876-876(2012).
RN [3] {ECO:0000313|Ensembl:ENSRNOP00000071139}
RP IDENTIFICATION.
RC STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000071139};
RG Ensembl;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSRNOP00000071139}.
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DR EMBL; AABR07032329; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR Ensembl; ENSRNOT00000082403; ENSRNOP00000071139; ENSRNOG00000017116.
DR RGD; 1311719; Zfp532.
DR GeneTree; ENSGT00530000063261; -.
DR OMA; FQSHVTK; -.
DR Proteomes; UP000002494; Chromosome 18.
DR ExpressionAtlas; A0A0G2JZQ5; baseline and differential.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 3.30.40.10; -; 3.
DR InterPro; IPR013087; Znf_C2H2_type.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR SMART; SM00355; ZnF_C2H2; 15.
DR SUPFAM; SSF57667; SSF57667; 5.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 9.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 8.
PE 1: Evidence at protein level;
KW Complete proteome {ECO:0000313|Proteomes:UP000002494};
KW Reference proteome {ECO:0000313|Proteomes:UP000002494}.
FT DOMAIN 669 687 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 921 949 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 956 983 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 987 1015 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 1076 1104 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 1106 1134 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 1255 1283 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 1316 1338 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
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CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 956 983 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 1136 1162 ismart:ZnF_C2H2 [T]
FT MYHIT 1255 1283 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 1106 1129 ismart:ZnF_C2H2 [T]
FT MYHIT 989 1010 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 958 978 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 893 916 ismart:ZnF_C2H2 [T]
FT MYHIT 921 949 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 1255 1278 ismart:ZnF_C2H2 [T]
FT MYHIT 1076 1104 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 1226 1248 ismart:ZnF_C2H2 [T]
FT MYHIT 836 858 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 1316 1338 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 1108 1129 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 669 689 ismart:ZnF_C2H2 [T]
FT MYHIT 921 944 ismart:ZnF_C2H2 [T]
FT MYHIT 923 944 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 987 1010 ismart:ZnF_C2H2 [T]
FT MYHIT 1318 1338 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 1078 1099 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 1106 1134 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 956 978 ismart:ZnF_C2H2 [T]
FT MYHIT 1257 1278 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 669 687 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 805 826 ismart:ZnF_C2H2 [T]
FT MYHIT 1076 1099 ismart:ZnF_C2H2 [T]
FT MYHIT 697 721 ismart:ZnF_C2H2 [T]
FT MYHIT 987 1015 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 1316 1338 ismart:ZnF_C2H2 [T]
FT MYHIT 834 856 ismart:ZnF_C2H2 [T]
FT MYHIT 895 916 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 862 886 ismart:ZnF_C2H2 [T]
SQ SEQUENCE 1353 AA; 147399 MW; AA06C2F25F09B219 CRC64;
MIACSLLTYC HHYEEDSTTT TLASRSWVER LTGIFFNHLW RGLAFFHSKH LIKFMTMGDM
KTPDFDDLLA AFDIPDMVDP KAAIESGHDD HESHIKQNAH VDDDSHTPSS SDVGVSVIVK
NVRNIDSSEG VEKDGHNPTG NGLHNGFLTA SSLDSYGKDG AKSLKGDTPA SEVTLKDPAF
SQFSPISSAE EFEDDEKIEV DDPPDKEETR ANFRSNVLTG SAPQQDFDKL KALGGENTSK
TGVSASGHAD KNKVKREAES NSITLSVYEP FKVRKAEDKL KENSEKMLES RVLDGKPSSE
KNDPAIAAAT SSKTKSSSKL SSCIAAIAAL SAKKAASDSC KEPVANSREA SPLPKEVNDS
PKAADKSPES QNLIDGTKKA SLKPSDSPRS VSSENSSKGS PSSPVGSTPA IPKVRIKTIK
TSSGEIKRTV TRVLPEVDLD SGKKPSEQAA SVMASVTSLL SSSASAAVLS SPPRAPLPTA
MVTSAVSSAE LTPKQVTIKP VATAFLPVSA VKTAGSQVIN LKLANNTTVK ATVISAASVQ
SASSAIIKAA NAIQQQTVVV PASSLANAKL VPKTVHLANL NLLPQGAQAT SELRQVLTKP
QQQIKQAILN AAAAQPPKKV SRVQVVSSLQ SSVVEAFNKV LSSVNPVPVY IPNLSPPASA
GITLPMRGYK CLECGDSFAL EKSLSQHYDR RSVRIEVTCN HCTKNLVFYN KCSLLSHARG
HKEKGVVMQC SHLILKPVPA DQMIVSPSSN TAASTLPSSV GAATHTVAKV QPGLTGAVIS
APPSTPISPA MPLDEDPSKL CRHSLKCLEC NEVFQDETSL ATHFQHAADT CGQKTCTVCQ
MLLPNQCSYA SHQRIHQHKS PYTCPECGAI CRSVHFQSHV TKNCLHYTRR VGFRCVHCNV
VYSDVAALKS HIQGSHCEVF YKCPICPMAF KSAPSTHSHA YTQHPGVKIG EPKIIYKCSM
CDTVFTLQTL LYRHFDQHID NQKVSVFKCP DCSLLYAQKQ LMMDHIKSMH GTLKSIEGPP
NLGINLPLSS KPATQNSANH SREDAKSMNG KEKLEKKSPS PAKKSTESKK MASLGWTCWE
CDRLFTQRDV YLSHMRKEHG KQMKKHPCRQ CDKSFSSSHS LCRHNRIKHK GIRKVYACSH
CPDSRRTFTK RLMLEKHIQL MHGIKDPDVK ELSDEVTNEE EVEIKEDAKV PSPKRKLEEP
VLEFRPPRGA ITQPLKKLKI NVFKVHKCAV CGFTTENLLQ FHEHIPQHKS DGSSYQCREC
GLCYTSHVSL SRHLFIVHKL KEPQPVSKQN GAGEDSQQEN KPSPEDEAAE GAVSDRKCKV
CAKTFETEAA LNTHMRTHGM AFIKSKRMSS AEK
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