MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | SubName: Full=Zinc finger protein 623 {ECO:0000313|Ensembl:ENSP00000411139}; |
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| MyHits synonyms | A0A0A0MT18_HUMAN , A0A0A0MT18 , 458B32B6086C8FB5 |
 Legends: 1, C2H2-type. {ECO:0000259|PROSITE:PS50157}; 2, ipat:ZINC_FINGER_C2H2_1 [T]; 3, iprf:ZINC_FINGER_C2H2_2 [T]; 4, ismart:ZnF_C2H2 [T].
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ID A0A0A0MT18_HUMAN Unreviewed; 496 AA.
AC A0A0A0MT18;
DT 07-JAN-2015, integrated into UniProtKB/TrEMBL.
DT 07-JAN-2015, sequence version 1.
DT 10-MAY-2017, entry version 22.
DE SubName: Full=Zinc finger protein 623 {ECO:0000313|Ensembl:ENSP00000411139};
GN Name=ZNF623 {ECO:0000313|Ensembl:ENSP00000411139};
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
OC Catarrhini; Hominidae; Homo.
OX NCBI_TaxID=9606 {ECO:0000313|Ensembl:ENSP00000411139, ECO:0000313|Proteomes:UP000005640};
RN [1] {ECO:0000313|Ensembl:ENSP00000411139}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=15815621; DOI=10.1038/nature03466;
RA Hillier L.W., Graves T.A., Fulton R.S., Fulton L.A., Pepin K.H.,
RA Minx P., Wagner-McPherson C., Layman D., Wylie K., Sekhon M.,
RA Becker M.C., Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E.,
RA Kremitzki C., Oddy L., Du H., Sun H., Bradshaw-Cordum H., Ali J.,
RA Carter J., Cordes M., Harris A., Isak A., van Brunt A., Nguyen C.,
RA Du F., Courtney L., Kalicki J., Ozersky P., Abbott S., Armstrong J.,
RA Belter E.A., Caruso L., Cedroni M., Cotton M., Davidson T., Desai A.,
RA Elliott G., Erb T., Fronick C., Gaige T., Haakenson W., Haglund K.,
RA Holmes A., Harkins R., Kim K., Kruchowski S.S., Strong C.M.,
RA Grewal N., Goyea E., Hou S., Levy A., Martinka S., Mead K.,
RA McLellan M.D., Meyer R., Randall-Maher J., Tomlinson C.,
RA Dauphin-Kohlberg S., Kozlowicz-Reilly A., Shah N.,
RA Swearengen-Shahid S., Snider J., Strong J.T., Thompson J., Yoakum M.,
RA Leonard S., Pearman C., Trani L., Radionenko M., Waligorski J.E.,
RA Wang C., Rock S.M., Tin-Wollam A.-M., Maupin R., Latreille P.,
RA Wendl M.C., Yang S.-P., Pohl C., Wallis J.W., Spieth J., Bieri T.A.,
RA Berkowicz N., Nelson J.O., Osborne J., Ding L., Meyer R., Sabo A.,
RA Shotland Y., Sinha P., Wohldmann P.E., Cook L.L., Hickenbotham M.T.,
RA Eldred J., Williams D., Jones T.A., She X., Ciccarelli F.D.,
RA Izaurralde E., Taylor J., Schmutz J., Myers R.M., Cox D.R., Huang X.,
RA McPherson J.D., Mardis E.R., Clifton S.W., Warren W.C.,
RA Chinwalla A.T., Eddy S.R., Marra M.A., Ovcharenko I., Furey T.S.,
RA Miller W., Eichler E.E., Bork P., Suyama M., Torrents D.,
RA Waterston R.H., Wilson R.K.;
RT "Generation and annotation of the DNA sequences of human chromosomes 2
RT and 4.";
RL Nature 434:724-731(2005).
RN [2] {ECO:0000313|Proteomes:UP000005640}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=16421571; DOI=10.1038/nature04406;
RA Nusbaum C., Mikkelsen T.S., Zody M.C., Asakawa S., Taudien S.,
RA Garber M., Kodira C.D., Schueler M.G., Shimizu A., Whittaker C.A.,
RA Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Yang X.,
RA Allen N.R., Anderson S., Asakawa T., Blechschmidt K., Bloom T.,
RA Borowsky M.L., Butler J., Cook A., Corum B., DeArellano K.,
RA DeCaprio D., Dooley K.T., Dorris L. III, Engels R., Glockner G.,
RA Hafez N., Hagopian D.S., Hall J.L., Ishikawa S.K., Jaffe D.B.,
RA Kamat A., Kudoh J., Lehmann R., Lokitsang T., Macdonald P.,
RA Major J.E., Matthews C.D., Mauceli E., Menzel U., Mihalev A.H.,
RA Minoshima S., Murayama Y., Naylor J.W., Nicol R., Nguyen C.,
RA O'Leary S.B., O'Neill K., Parker S.C., Polley A., Raymond C.K.,
RA Reichwald K., Rodriguez J., Sasaki T., Schilhabel M., Siddiqui R.,
RA Smith C.L., Sneddon T.P., Talamas J.A., Tenzin P., Topham K.,
RA Venkataraman V., Wen G., Yamazaki S., Young S.K., Zeng Q.,
RA Zimmer A.R., Rosenthal A., Birren B.W., Platzer M., Shimizu N.,
RA Lander E.S.;
RT "DNA sequence and analysis of human chromosome 8.";
RL Nature 439:331-335(2006).
RN [3] {ECO:0000313|Ensembl:ENSP00000411139}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2014) to UniProtKB.
RN [4] {ECO:0000313|Ensembl:ENSP00000481049}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSP00000411139}.
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DR EMBL; AC067930; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AC105210; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AC243411; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; KF495785; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; NP_001075949.1; NM_001082480.2.
DR RefSeq; NP_001248772.1; NM_001261843.1.
DR RefSeq; XP_006716771.1; XM_006716708.3.
DR UniGene; Hs.43133; -.
DR UniGene; Hs.694018; -.
DR UniGene; Hs.745418; -.
DR STRING; 9606.ENSP00000434258; -.
DR Ensembl; ENST00000458270; ENSP00000411139; ENSG00000183309.
DR Ensembl; ENST00000526926; ENSP00000435232; ENSG00000183309.
DR Ensembl; ENST00000618766; ENSP00000481049; ENSG00000276340.
DR Ensembl; ENST00000620499; ENSP00000484164; ENSG00000276340.
DR GeneID; 9831; -.
DR UCSC; uc003yzc.4; human.
DR CTD; 9831; -.
DR HGNC; HGNC:29084; ZNF623.
DR OpenTargets; ENSG00000183309; -.
DR eggNOG; KOG1721; Eukaryota.
DR eggNOG; COG5048; LUCA.
DR GeneTree; ENSGT00850000132387; -.
DR OrthoDB; EOG091G02KC; -.
DR GenomeRNAi; 9831; -.
DR Proteomes; UP000005640; Chromosome 8.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR InterPro; IPR013087; Znf_C2H2_type.
DR SMART; SM00355; ZnF_C2H2; 13.
DR SUPFAM; SSF57667; SSF57667; 7.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 13.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 13.
PE 1: Evidence at protein level;
KW Complete proteome {ECO:0000313|Proteomes:UP000005640};
KW Proteomics identification {ECO:0000213|EPD:A0A0A0MT18,
KW ECO:0000213|MaxQB:A0A0A0MT18, ECO:0000213|PeptideAtlas:A0A0A0MT18};
KW Reference proteome {ECO:0000313|Proteomes:UP000005640}.
FT DOMAIN 83 110 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 111 138 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 139 166 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 167 194 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 195 222 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 223 250 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 251 278 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 279 306 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 307 334 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 335 362 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 363 390 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 391 418 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 419 446 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 365 385 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 225 245 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 279 306 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 335 357 ismart:ZnF_C2H2 [T]
FT MYHIT 85 105 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 141 161 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 139 161 ismart:ZnF_C2H2 [T]
FT MYHIT 113 133 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 281 301 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 197 217 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 111 138 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 391 413 ismart:ZnF_C2H2 [T]
FT MYHIT 83 110 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 391 418 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 419 441 ismart:ZnF_C2H2 [T]
FT MYHIT 251 273 ismart:ZnF_C2H2 [T]
FT MYHIT 419 446 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 195 217 ismart:ZnF_C2H2 [T]
FT MYHIT 169 189 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 363 390 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 223 250 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 307 329 ismart:ZnF_C2H2 [T]
FT MYHIT 337 357 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 83 105 ismart:ZnF_C2H2 [T]
FT MYHIT 167 189 ismart:ZnF_C2H2 [T]
FT MYHIT 393 413 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 307 334 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 167 194 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 111 133 ismart:ZnF_C2H2 [T]
FT MYHIT 253 273 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 279 301 ismart:ZnF_C2H2 [T]
FT MYHIT 363 385 ismart:ZnF_C2H2 [T]
FT MYHIT 251 278 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 223 245 ismart:ZnF_C2H2 [T]
FT MYHIT 195 222 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 309 329 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 335 362 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 421 441 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 139 166 iprf:ZINC_FINGER_C2H2_2 [T]
SQ SEQUENCE 496 AA; 56957 MW; 458B32B6086C8FB5 CRC64;
MELPSPESEE VHEPRLGELL GNPEGQSLGS SPSQDRGCKQ VTVTHWKIQT GETAQVCTKS
GRNHILNSDL LLLQRELIEG EANPCDICGK TFTFNSDLVR HRISHAGEKP YTCDQCGKGF
GQSSHLMEHQ RIHTGERLYV CNVCGKDFIH YSGLIEHQRV HSGEKPFKCA QCGKAFCHSS
DLIRHQRVHT RERPFECKEC GKGFSQSSLL IRHQRIHTGE RPYECNECGK SFIRSSSLIR
HYQIHTEVKQ YECKECGKAF RHRSDLIEHQ RIHTGERPFE CNECGKAFIR SSKLIQHQRI
HTGERPYVCN ECGKRFSQTS NFTQHQRIHT GEKLYECNEC GKAFFLSSYL IRHQKIHTGE
RVYECKECGK AFLQKAHLTE HQKIHSGDRP FECKDCGKAF IQSSKLLLHQ IIHTGEKPYV
CSYCGKGFIQ RSNFLQHQKI HTEEKLYECS QYGRDFNSTT NVKNNQRVHQ EGLSLSKAPI
HLGERSVDKG EHTGNL
//
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