ID A0A096MJL0_RAT Unreviewed; 517 AA.
AC A0A096MJL0;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 10-MAY-2017, entry version 16.
DE SubName: Full=Intraflagellar transport protein 172 homolog {ECO:0000313|Ensembl:ENSRNOP00000072658};
DE Flags: Fragment;
GN Name=Ift172 {ECO:0000313|Ensembl:ENSRNOP00000072658,
GN ECO:0000313|RGD:620744};
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
OC Muroidea; Muridae; Murinae; Rattus.
OX NCBI_TaxID=10116 {ECO:0000313|Ensembl:ENSRNOP00000072658, ECO:0000313|Proteomes:UP000002494};
RN [1] {ECO:0000313|Ensembl:ENSRNOP00000072658, ECO:0000313|Proteomes:UP000002494}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000072658,
RC ECO:0000313|Proteomes:UP000002494};
RX PubMed=15057822; DOI=10.1038/nature02426;
RG Rat Genome Sequencing Project Consortium;
RA Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J.,
RA Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G.,
RA Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G.,
RA Morgan M., Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G.,
RA Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S.,
RA Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T.,
RA Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T.,
RA Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A.,
RA Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M.,
RA Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K.,
RA Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S.,
RA Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J.,
RA Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y.,
RA Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A.,
RA Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J.,
RA D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R.,
RA Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A.,
RA Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E.,
RA Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E.,
RA Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J.,
RA Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D.,
RA Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M.,
RA Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O.,
RA Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O.,
RA Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H.,
RA Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S.,
RA Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J.,
RA Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M.,
RA Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E.,
RA Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F.,
RA Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K.,
RA Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S.,
RA Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M.,
RA Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M.,
RA Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A.,
RA Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S.,
RA Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G.,
RA Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H.,
RA Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R.,
RA Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M.,
RA Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H.,
RA Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S.,
RA Collins F.S.;
RT "Genome sequence of the Brown Norway rat yields insights into
RT mammalian evolution.";
RL Nature 428:493-521(2004).
RN [2] {ECO:0000313|Ensembl:ENSRNOP00000072658}
RP IDENTIFICATION.
RC STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000072658};
RG Ensembl;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSRNOP00000072658}.
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DR EMBL; AABR07063279; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AABR07063280; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AABR07063281; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR PaxDb; A0A096MJL0; -.
DR Ensembl; ENSRNOT00000085424; ENSRNOP00000072658; ENSRNOG00000057813.
DR RGD; 620744; Ift172.
DR eggNOG; KOG3616; Eukaryota.
DR eggNOG; ENOG410XR2C; LUCA.
DR GeneTree; ENSGT00440000033648; -.
DR Reactome; R-RNO-5620924; Intraflagellar transport.
DR Proteomes; UP000002494; Chromosome 6.
DR ExpressionAtlas; A0A096MJL0; differential.
DR Gene3D; 1.25.40.10; -; 1.
DR Gene3D; 2.130.10.10; -; 2.
DR InterPro; IPR011044; Quino_amine_DH_bsu.
DR InterPro; IPR011990; TPR-like_helical_dom.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom.
DR SUPFAM; SSF50969; SSF50969; 2.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000002494};
KW Reference proteome {ECO:0000313|Proteomes:UP000002494}.
FT NON_TER 1 1 {ECO:0000313|Ensembl:ENSRNOP00000072658}.
FT NON_TER 517 517 {ECO:0000313|Ensembl:ENSRNOP00000072658}.
SQ SEQUENCE 517 AA; 58255 MW; 38CEF145BB78D998 CRC64;
XEHSVVGWNS LTAASEGAFT RTSSRRTVSS LTYVGPSQVI VKNLSSGTRV VLKSHYGYEV
EEVKILGKER YLVAHTSDTL LLGDLNTNRL SEIPWQGSGG NEKYFFENEN VCMIFNAGEL
TLVEYGSNDS LGSVRTEFMN PHLISVRINE RCQRGMEDNK KLAYLVDIKT IAIVDLIGGY
NIGTISHESR VDWLELNETG HKLLFRDRKL RLHLYDIESC SKTMILNFCS YVQWVPGSDV
LVAQNRNSLC VWYNIEAPER VTMSSIRGDV VGLERGGGKT EVMVTEGVTT VAYTLDEGLI
EFGTAIDDGN YTRATAFLET LEMTPETEAM WKTLSKLALE ARQLHTAERC FSALGHVAKA
RFLHETNEIA DQVSREYGGE GTDFYQVRAR LAMLEKNYKL AEMIFLEQNA VEEAMDMYQE
LHRWDECIAV AEAKGHPALE KLRRDYYQWL MDTQQEERAG ELQESQGDGL AAISLYLKAG
LPAKAARLVL TREELLANTE LVEHITTALI KGELYER
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