MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | RecName: Full=Uncharacterized protease ydcP; EC=3.4.-.-; Flags: Precursor; |
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| MyHits synonyms | YDCP_ECOLI , P76104 , P76865 , P76867 , P76868 , 5875B4E9C2F4FC82 |
 Legends: 1, SIGNAL Potential; 2, ipat:PEPTIDASE_U32 [T].
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ID YDCP_ECOLI Reviewed; 653 AA.
AC P76104; P76865; P76867; P76868;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1997, sequence version 2.
DT 03-NOV-2009, entry version 65.
DE RecName: Full=Uncharacterized protease ydcP;
DE EC=3.4.-.-;
DE Flags: Precursor;
GN Name=ydcP; OrderedLocusNames=b1435, JW1431;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX MEDLINE=97251357; PubMed=9097039; DOI=10.1093/dnares/3.6.363;
RA Aiba H., Baba T., Fujita K., Hayashi K., Inada T., Isono K., Itoh T.,
RA Kasai H., Kashimoto K., Kimura S., Kitakawa M., Kitagawa M.,
RA Makino K., Miki T., Mizobuchi K., Mori H., Mori T., Motomura K.,
RA Nakade S., Nakamura Y., Nashimoto H., Nishio Y., Oshima T., Saito N.,
RA Sampei G., Seki Y., Sivasundaram S., Tagami H., Takeda J.,
RA Takemoto K., Takeuchi Y., Wada C., Yamamoto Y., Horiuchi T.;
RT "A 570-kb DNA sequence of the Escherichia coli K-12 genome
RT corresponding to the 28.0-40.1 min region on the linkage map.";
RL DNA Res. 3:363-377(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX MEDLINE=97426617; PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J.,
RA Mau B., Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1474(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains
RT MG1655 and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
CC -!- INTERACTION:
CC P0AEQ3:glnH; NbExp=1; IntAct=EBI-556974, EBI-1120408;
CC P05824:recN; NbExp=1; IntAct=EBI-556974, EBI-548098;
CC -!- SIMILARITY: Belongs to the peptidase U32 family.
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DR EMBL; U00096; AAC74517.1; ALT_INIT; Genomic_DNA.
DR EMBL; AP009048; BAA15068.1; -; Genomic_DNA.
DR RefSeq; AP_002058.1; -.
DR RefSeq; NP_415952.2; -.
DR DIP; DIP:11650N; -.
DR IntAct; P76104; 50.
DR STRING; P76104; -.
DR GeneID; 945993; -.
DR GenomeReviews; AP009048_GR; JW1431.
DR GenomeReviews; U00096_GR; b1435.
DR KEGG; ecj:JW1431; -.
DR KEGG; eco:b1435; -.
DR EchoBASE; EB3522; -.
DR EcoGene; EG13759; ydcP.
DR HOGENOM; P76104; -.
DR OMA; FSGNCYM; -.
DR BioCyc; EcoCyc:G6746-MON; -.
DR Genevestigator; P76104; -.
DR GO; GO:0008233; F:peptidase activity; IEA:UniProtKB-KW.
DR GO; GO:0005515; F:protein binding; IPI:IntAct.
DR GO; GO:0006508; P:proteolysis; IEA:InterPro.
DR InterPro; IPR001539; Peptidase_U32.
DR Pfam; PF01136; Peptidase_U32; 1.
DR ProDom; PD004398; Peptidase_U32; 1.
DR PROSITE; PS01276; PEPTIDASE_U32; 1.
PE 1: Evidence at protein level;
KW Complete proteome; Hydrolase; Protease; Signal.
FT SIGNAL 1 20 Potential.
FT CHAIN 21 653 Uncharacterized protease ydcP.
FT /FTId=PRO_0000028524.
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CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 391 505 ipfam:DUF3656 [T]
FT MYHIT 79 305 ipfam:Peptidase_U32 [T]
FT MYHIT 161 179 ipat:PEPTIDASE_U32 [T]
SQ SEQUENCE 653 AA; 72702 MW; 5875B4E9C2F4FC82 CRC64;
MTVSSHRLEL LSPARDAAIA REAILHGADA VYIGGPGFGA RHNASNSLKD IAELVPFAHR
YGAKIFVTLN TILHDDELEP AQRLITDLYQ TGVDALIVQD MGILELDIPP IELHASTQCD
IRTVEKAKFL SDVGFTQIVL ARELNLDQIR AIHQATDATI EFFIHGALCV AYSGQCYISH
AQTGRSANRG DCSQACRLPY TLKDDQGRVV SYEKHLLSMK DNDQTANLGA LIDAGVRSFK
IEGRYKDMSY VKNITAHYRQ MLDAIIEERG DLARASSGRT EHFFVPSTEK TFHRGSTDYF
VNARKGDIGA FDSPKFIGLP VGEVVKVAKD HLDVAVTEPL ANGDGLNVLI KREVVGFRAN
TVEKTGENQY RVWPNEMPAD LHKIRPHHPL NRNLDHNWQQ ALTKTSSERR VAVDIELGGW
QEQLILTLTS EEGVSITHTL DGQFDEANNA EKAMNNLKDG LAKLGQTLYY ARDVQINLPG
ALFVPNSLLN QFRREAADML DAARLASYQR GSRKPVADPA PVYPQTHLSF LANVYNQKAR
EFYHRYGVQL IDAAYEAHEE KGEVPVMITK HCLRFAFNLC PKQAKGNIKS WKATPMQLVN
GDEVLTLKFD CRPCEMHVIG KIKNHILKMP LPGSVVASVS PDELLKTLPK RKG
//
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