MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | RecName: Full=30S ribosomal protein S17 {ECO:0000255|HAMAP-Rule:MF_01345}; |
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| MyHits synonyms | RS17_BURPS , Q63Q20 , 87336B53A1C6FED3 |
 Legends: 1, ipat:RIBOSOMAL_S17 [T].
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ID RS17_BURPS Reviewed; 90 AA.
AC Q63Q20;
DT 02-MAY-2006, integrated into UniProtKB/Swiss-Prot.
DT 25-OCT-2004, sequence version 1.
DT 12-APR-2017, entry version 78.
DE RecName: Full=30S ribosomal protein S17 {ECO:0000255|HAMAP-Rule:MF_01345};
GN Name=rpsQ {ECO:0000255|HAMAP-Rule:MF_01345};
GN OrderedLocusNames=BPSL3204;
OS Burkholderia pseudomallei (strain K96243).
OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC Burkholderiaceae; Burkholderia; pseudomallei group.
OX NCBI_TaxID=272560;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K96243;
RX PubMed=15377794; DOI=10.1073/pnas.0403302101;
RA Holden M.T.G., Titball R.W., Peacock S.J., Cerdeno-Tarraga A.-M.,
RA Atkins T., Crossman L.C., Pitt T., Churcher C., Mungall K.L.,
RA Bentley S.D., Sebaihia M., Thomson N.R., Bason N., Beacham I.R.,
RA Brooks K., Brown K.A., Brown N.F., Challis G.L., Cherevach I.,
RA Chillingworth T., Cronin A., Crossett B., Davis P., DeShazer D.,
RA Feltwell T., Fraser A., Hance Z., Hauser H., Holroyd S., Jagels K.,
RA Keith K.E., Maddison M., Moule S., Price C., Quail M.A.,
RA Rabbinowitsch E., Rutherford K., Sanders M., Simmonds M.,
RA Songsivilai S., Stevens K., Tumapa S., Vesaratchavest M.,
RA Whitehead S., Yeats C., Barrell B.G., Oyston P.C.F., Parkhill J.;
RT "Genomic plasticity of the causative agent of melioidosis,
RT Burkholderia pseudomallei.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:14240-14245(2004).
CC -!- FUNCTION: One of the primary rRNA binding proteins, it binds
CC specifically to the 5'-end of 16S ribosomal RNA.
CC {ECO:0000255|HAMAP-Rule:MF_01345}.
CC -!- SUBUNIT: Part of the 30S ribosomal subunit. {ECO:0000255|HAMAP-
CC Rule:MF_01345}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS17
CC family. {ECO:0000255|HAMAP-Rule:MF_01345}.
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DR EMBL; BX571965; CAH37215.1; -; Genomic_DNA.
DR RefSeq; WP_004201274.1; NZ_CP009538.1.
DR RefSeq; YP_109798.1; NC_006350.1.
DR ProteinModelPortal; Q63Q20; -.
DR SMR; Q63Q20; -.
DR STRING; 272560.BPSL3204; -.
DR PRIDE; Q63Q20; -.
DR EnsemblBacteria; CAH37215; CAH37215; BPSL3204.
DR GeneID; 3094358; -.
DR KEGG; bps:BPSL3204; -.
DR PATRIC; 19266937; VBIBurPse99623_3657.
DR eggNOG; ENOG4105K87; Bacteria.
DR eggNOG; COG0186; LUCA.
DR HOGENOM; HOG000231339; -.
DR KO; K02961; -.
DR OMA; LKAHDEQ; -.
DR Proteomes; UP000000605; Chromosome 1.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR HAMAP; MF_01345_B; Ribosomal_S17_B; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR019984; Ribosomal_S17.
DR InterPro; IPR000266; Ribosomal_S17/S11.
DR InterPro; IPR019979; Ribosomal_S17_CS.
DR PANTHER; PTHR10744; PTHR10744; 1.
DR Pfam; PF00366; Ribosomal_S17; 1.
DR PRINTS; PR00973; RIBOSOMALS17.
DR ProDom; PD001295; Ribosomal_S17; 1.
DR SUPFAM; SSF50249; SSF50249; 1.
DR TIGRFAMs; TIGR03635; uS17_bact; 1.
DR PROSITE; PS00056; RIBOSOMAL_S17; 1.
PE 3: Inferred from homology;
KW Complete proteome; Reference proteome; Ribonucleoprotein;
KW Ribosomal protein; RNA-binding; rRNA-binding.
FT CHAIN 1 90 30S ribosomal protein S17.
FT /FTId=PRO_0000233446.
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CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 15 81 ipfam:Ribosomal_S17 [T]
FT MYHIT 10 85 ihamap:Ribosomal_S17_B [T]
FT MYHIT 61 73 ipat:RIBOSOMAL_S17 [T]
SQ SEQUENCE 90 AA; 10249 MW; 87336B53A1C6FED3 CRC64;
MNDSVKTSLK RTLVGKVVSN KMDKTVTVLV EHRVKHPIYG KYVVRSKKYH AHDEANTYNE
GDLVEIQETR PVSKTKAWAV SRLVEAARVI
//
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