MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
Description | SubName: Full=84% identity over 251 amino acids with E. coli THIF protein (SW:P30138); contains similarity to Pfam domain PF00899 (ThiF_family), Score=199.9, E=3.9e-56, N=1 {ECO:0000313|EMBL:AAF33509.1}; SubName: Full=Thiamin biosynthesis protein, thiazole moiety {ECO:0000313|EMBL:AAL22990.1}; |
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MyHits synonyms | Q9L9I9_SALTY , Q9L9I9 , Q7BPM6 , 9019E6D01C233F8A |
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ID Q9L9I9_SALTY Unreviewed; 252 AA. AC Q9L9I9; Q7BPM6; DT 01-OCT-2000, integrated into UniProtKB/TrEMBL. DT 01-OCT-2000, sequence version 1. DT 10-MAY-2017, entry version 95. DE SubName: Full=84% identity over 251 amino acids with E. coli THIF protein (SW:P30138); contains similarity to Pfam domain PF00899 (ThiF_family), Score=199.9, E=3.9e-56, N=1 {ECO:0000313|EMBL:AAF33509.1}; DE SubName: Full=Thiamin biosynthesis protein, thiazole moiety {ECO:0000313|EMBL:AAL22990.1}; GN Name=thiF {ECO:0000313|EMBL:AAL22990.1}; GN OrderedLocusNames=STM4162 {ECO:0000313|EMBL:AAL22990.1}; OS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720). OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; OC Enterobacteriaceae; Salmonella. OX NCBI_TaxID=99287 {ECO:0000313|EMBL:AAL22990.1, ECO:0000313|Proteomes:UP000001014}; RN [1] {ECO:0000313|EMBL:AAF33509.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=SGSC1412 {ECO:0000313|EMBL:AAF33509.1}; RA WashU; RT "The Salmonella typhimurium Genome Sequencing Project."; RL Submitted (NOV-1999) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EMBL:AAF33509.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=SGSC1412 {ECO:0000313|EMBL:AAF33509.1}; RA Latreille, P; RT "The sequence of Salmonella typhimurium fragment STMF1 (I-Ceu-F)."; RL Submitted (NOV-1999) to the EMBL/GenBank/DDBJ databases. RN [3] {ECO:0000313|EMBL:AAF33509.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=SGSC1412 {ECO:0000313|EMBL:AAF33509.1}; RA Waterston R.; RL Submitted (FEB-2000) to the EMBL/GenBank/DDBJ databases. RN [4] {ECO:0000313|EMBL:AAL22990.1, ECO:0000313|Proteomes:UP000001014} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=LT2 {ECO:0000313|EMBL:AAL22990.1}, and RC LT2 / SGSC1412 / ATCC 700720 {ECO:0000313|Proteomes:UP000001014}; RX PubMed=11677609; DOI=10.1038/35101614; RA McClelland M., Sanderson K.E., Spieth J., Clifton S.W., Latreille P., RA Courtney L., Porwollik S., Ali J., Dante M., Du F., Hou S., Layman D., RA Leonard S., Nguyen C., Scott K., Holmes A., Grewal N., Mulvaney E., RA Ryan E., Sun H., Florea L., Miller W., Stoneking T., Nhan M., RA Waterston R., Wilson R.K.; RT "Complete genome sequence of Salmonella enterica serovar Typhimurium RT LT2."; RL Nature 413:852-856(2001). RN [5] {ECO:0000313|EMBL:AAL22990.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=LT2 {ECO:0000313|EMBL:AAL22990.1}; RG The Salmonella typhimurium Genome Sequencing Project; RL Submitted (MAR-2001) to the EMBL/GenBank/DDBJ databases. RN [6] {ECO:0000313|EMBL:AAL22990.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=LT2 {ECO:0000313|EMBL:AAL22990.1}; RA McClelland M., Jain A., Saraogi P., Mendelson R., Westerman R., RA SanMiguel P., Csonka L.; RL Submitted (JAN-2016) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AF170176; AAF33509.1; -; Genomic_DNA. DR EMBL; AE006468; AAL22990.1; -; Genomic_DNA. DR RefSeq; NP_463031.1; NC_003197.2. DR RefSeq; WP_000997753.1; NC_003197.2. DR STRING; 99287.STM4162; -. DR EnsemblBacteria; AAL22990; AAL22990; STM4162. DR GeneID; 1255688; -. DR KEGG; stm:STM4162; -. DR PATRIC; 32387209; VBISalEnt20916_4376. DR eggNOG; ENOG4105D06; Bacteria. DR eggNOG; COG0476; LUCA. DR HOGENOM; HOG000281217; -. DR KO; K03148; -. DR OMA; YHCLFPF; -. DR Proteomes; UP000001014; Chromosome. DR GO; GO:0008641; F:small protein activating enzyme activity; IEA:InterPro. DR InterPro; IPR000594; ThiF_NAD_FAD-bd. DR Pfam; PF00899; ThiF; 1. DR SUPFAM; SSF69572; SSF69572; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000001014}; KW Reference proteome {ECO:0000313|Proteomes:UP000001014}. FT DOMAIN 9 240 ThiF. {ECO:0000259|Pfam:PF00899}. CC -------------------------------------------------------------------------- CC The following FT lines are automated annotations from the MyHits database. CC -------------------------------------------------------------------------- FT MYHIT 9 240 ipfam:ThiF [T] SQ SEQUENCE 252 AA; 26891 MW; 9019E6D01C233F8A CRC64; MNDHDFMRYS RQILLGDIAI EGQQKLLNSH VLIVGLGGLG SPAALYLAGA GIGKLTLVDD DDVHLSNLQR QILFTTDDIA HPKAQAAKLR LAQLNPGSKL IVLQQRLTGD VLKNAVAHAD VVLDCTDNMA TRQEINAACV ALNTPLISAS AVGFGGQLMV LTPPWEQGCY RCLWPDDVEP ERNCRTAGIV GPVVGVMGTL QALEAIKLLS GIETPSGELR LFDGKTSQWR SLALRHASGC PVCGGQHADS VQ // |