BLASTP/PSI-BLAST

This web interface to PSI-BLAST is meant to be used in conjunction with the MSA hub. To make a proficient use of this service, new users are warmly encouraged to read and try the tutorial.

Sequence Input

Protein Identifiers
or Protein Sequence
or MSA Input

Mandatory parameters

seq_source sw - Swiss-Prot
bact - Some complete proteomes from Bacteria
arch - Some complete proteomes from Archaea
euk - Some complete proteomes from Eukaryota
ur50 - UniRef50
ur50_win20 - UniRef50 window shuffled (w=20)
ecoli - Escherichia coli K12 proteome

Show optional parameters