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Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7

DescriptionRecName: Full=Defensin-like protein 301; Flags: Precursor;
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MyHits synonymsDF301_ARATH , Q3E715 , 46421D539EA217E4
match map segment
 
Legends: 1, SIGNAL {ECO:0000255}.
ID   DF301_ARATH             Reviewed;          97 AA.
AC   Q3E715;
DT   28-JUL-2009, integrated into UniProtKB/Swiss-Prot.
DT   08-NOV-2005, sequence version 1.
DT   12-APR-2017, entry version 49.
DE   RecName: Full=Defensin-like protein 301;
DE   Flags: Precursor;
GN   OrderedLocusNames=At5g04045; ORFNames=F8F6;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
OC   Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130714; DOI=10.1038/35048507;
RA   Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA   Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K.,
RA   Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S.,
RA   Nakazaki N., Naruo K., Okumura S., Shinpo S., Takeuchi C., Wada T.,
RA   Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M.,
RA   Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R.,
RA   Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J.,
RA   Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M.,
RA   Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M.,
RA   Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P.,
RA   Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C.,
RA   Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N.,
RA   Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J.,
RA   Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA   Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA   Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA   Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S.,
RA   Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W.,
RA   Ramsperger U., Wedler H., Balke K., Wedler E., Peters S.,
RA   van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R.,
RA   Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S.,
RA   Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W.,
RA   Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H.,
RA   Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F.;
RT   "Sequence and analysis of chromosome 5 of the plant Arabidopsis
RT   thaliana.";
RL   Nature 408:823-826(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RG   The Arabidopsis Information Portal (Araport);
RL   Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=14993207; DOI=10.1101/gr.1515604;
RA   Castelli V., Aury J.-M., Jaillon O., Wincker P., Clepet C., Menard M.,
RA   Cruaud C., Quetier F., Scarpelli C., Schaechter V., Temple G.,
RA   Caboche M., Weissenbach J., Salanoubat M.;
RT   "Whole genome sequence comparisons and 'full-length' cDNA sequences: a
RT   combined approach to evaluate and improve Arabidopsis genome
RT   annotation.";
RL   Genome Res. 14:406-413(2004).
RN   [4]
RP   GENE FAMILY.
RX   PubMed=15955924; DOI=10.1104/pp.105.060079;
RA   Silverstein K.A.T., Graham M.A., Paape T.D., VandenBosch K.A.;
RT   "Genome organization of more than 300 defensin-like genes in
RT   Arabidopsis.";
RL   Plant Physiol. 138:600-610(2005).
CC   -!- SUBCELLULAR LOCATION: Secreted {ECO:0000250}.
CC   -!- SIMILARITY: Belongs to the DEFL family. {ECO:0000305}.
CC   -!- CAUTION: Contains 6 disulfide bonds instead of the 4 disulfide
CC       bonds, which are conserved features of the family. {ECO:0000305}.
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DR   EMBL; AL162873; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CP002688; AED90688.1; -; Genomic_DNA.
DR   EMBL; BX833563; -; NOT_ANNOTATED_CDS; mRNA.
DR   RefSeq; NP_974727.1; NM_202998.2.
DR   UniGene; At.49782; -.
DR   ProteinModelPortal; Q3E715; -.
DR   SMR; Q3E715; -.
DR   PaxDb; Q3E715; -.
DR   EnsemblPlants; AT5G04045.1; AT5G04045.1; AT5G04045.
DR   GeneID; 2745976; -.
DR   Gramene; AT5G04045.1; AT5G04045.1; AT5G04045.
DR   KEGG; ath:AT5G04045; -.
DR   Araport; AT5G04045; -.
DR   TAIR; locus:1006230523; AT5G04045.
DR   HOGENOM; HOG000131598; -.
DR   InParanoid; Q3E715; -.
DR   OMA; NSHVICD; -.
DR   OrthoDB; EOG09361D27; -.
DR   PhylomeDB; Q3E715; -.
DR   PRO; PR:Q3E715; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; Q3E715; baseline.
DR   GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR   GO; GO:0050832; P:defense response to fungus; IEA:UniProtKB-KW.
DR   GO; GO:0031640; P:killing of cells of other organism; IEA:UniProtKB-KW.
PE   3: Inferred from homology;
KW   Antimicrobial; Complete proteome; Disulfide bond; Fungicide;
KW   Plant defense; Reference proteome; Secreted; Signal.
FT   SIGNAL        1     24       {ECO:0000255}.
FT   CHAIN        25     97       Defensin-like protein 301.
FT                                /FTId=PRO_0000379758.
FT   DISULFID     28     47       {ECO:0000250}.
FT   DISULFID     34     53       {ECO:0000250}.
FT   DISULFID     39     55       {ECO:0000250}.
FT   DISULFID     65     84       {ECO:0000250}.
FT   DISULFID     71     92       {ECO:0000250}.
FT   DISULFID     76     94       {ECO:0000250}.
SQ   SEQUENCE   97 AA;  10401 MW;  46421D539EA217E4 CRC64;
     MEKVTSIFFV LLLISSCLIL RSQGQFRCKS VAECDSRGCR VGTHVICNEH HICTCAHGSP
     IGGQCDGVED CDLSGCPPNS HVICDRIGGN FCTCVPN
//